| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0177 |
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| Symbol | |
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| ID | 6973569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 193512 |
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| End bp | 195533 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643389710 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002274591 |
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| Protein GI | 209542362 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0429292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.082648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGTC TTCTCCCCTT CTTTCCCCTT CCCGTTCTCG CCTGCCTGGC GCTGCTGGGC
GGGTCGGCGC GTGCCGATTC ATCCGGCCTG CCGGAACCGC CCCGGTCGGT GCCGTCCGAT
GCGGTCGTCC CCCCTGCGGT GCCGGATGGG ACATCGGATG CGGTCGCGGC GCGGGTGGAT
ACGTATCTGC GCCTGCTCTC GCCCCTTGGT GGCGATATCG ACGAGTACCT GTCCTTCCTG
GACCAGACCC CGACCTGGCC GCGCCGCGCG GTCATGCTGG GCCGCCTGCA ACGGCTGATG
GCGGTGGCGG CCCCGGGCGT GCCCGGGATG GCGCAGGCCT GCGCCACCCT GACCCTGACC
TATGCCCCCG CCCTGGCGGC CTGTGCCCGC CAGCCGGTTC CCGCCCCCGA CCTGCCGGCC
CGCGCGCGCC ATGCCTGGAC CGAGGGCGTC GACCAGATGG AGGACGAAGC CGCGTTTCTG
GCCGCGTTCG CCCCCGTCCT GACCCCGGCC GACCAATGGC ATCGCTTCAT GCGGCAGGAA
CTGACGGGGC ATCTGGATGC CGCCCAGCGA CAGGTGGCGC GCGTGGATAT CGGCCGTCAG
GCCCTAGCCC GGGCGCGCCT GTCGCTACGG ATGGGCTGGT CGGATACCCC CGCCCTGCTG
GCGCTGGTTC CCCCTGCCCT GTCCGACGAT CCGGTGCTGG TGCTGGACCG GATTCGCTGG
CTGCGCCGGT CCGGGCAGGC CGACCTCGCC GCCGCGCTGT GGGCCCAGTC GGGGCCGGCG
GCAGAGCAGC GCGTGGCGGA TCCCGCCTTC GCGGCCGCCA TAAAGGCCGC CTTCTGGGCG
GAACGCGACG CCCTGGCCCA CGACATGATG CTGGCCGGCC GGGACAAGGA AGCCCTGGCC
CTGGCCACGG CTTCCGACGA CATGGCGCCC ACGGACCGTA ACGCGGCGCG GTTCCTGTCG
GGCTGGATCC TGCTGCAGCA CGATCATGAC CCGCATGCCG CGCTGGCCCG GTTCCGCCCG
CTGTGCGACG CGTCGTCGCT GCTGACGCGC AGCCGGGGCC TGTACTGGAC CGGCCGTGCC
CTGTCGGACC TGGGCGACCG GGATGGTGCC CGCACCGCCT GGGGGCAGGC TGCCGCCCTG
CCCGGCACCT TCTATGGCCA GATGGCGGCA TCCCGGCTGG CAGGGGACAC GGCCAGCCCC
CTGCTGTTCC CCGAGCGATC GGGCGACCTG GTGCGGTCGC GGCTGGGCGC CATTCCGGGG
CCGGTCTGGA CCCCGGACGA CAAGGCGCGT TTCGATGCCA GCGACCTGGT GCAGGCCGCC
CGGCTGCTGG CCGCACGGCA TGATTTGGGT CATGCGCGCG ATTTCCTGCT GTTGCAGGAT
ACGCGGACAG GCGGGACCGC CGGCCACGTC CTGGCCGCGA CGCTGGCGCT GCAGCTCGGC
CTGCCGGATG TCGCGGTGTC GATCGCCCGC CGCGCGGGGC GCGAGGGCAC GGCATTGCTG
CCCTTGGGCT GGCCCGTCCC GTTCTCACCA GCCTTGTCCT CGGTCCCTGG CGAGGGGCTG
CCCCCCGGTT TCCTGATGGC CGTGATCCGG CAGGAAAGCG GGTTCGATCC CGGCATCGTC
AGCCCGGCCG GCGCCTATGG CCTGATGCAG CTTATGCCGG CGGCGGCGCG GGACGTGTCG
CGGCAGGCCC GGCTGGCGAC CGGTCCGCTG ACCGGCGCGC GCCTGACGGA CCCGGACCTG
AACATACGTA TCGGCAGCGC CTACCTGGTG CGGCTGATGC AGAAATTCGG CGGCGCGGTG
CCCTATGTGC TGGCGGCTTA CAATGCCGGG CCCCACCGGG CGGACGAATG GCTGGCCCTG
CTGGGCGATC CGGCACGAGG CACGCCCACG GCCGACGCCA TGCTGGACTG GATCGAAAGC
ATTCCGTTCG CGGAAACCAG AAGCTATATC CAGCGCGTGG AAGAAAACAT GGCCATCTAC
CAGGCGCTGG CCGCCTCCGC CCAGGCGGAG GCCGCGCCAT GA
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| Protein sequence | MRRLLPFFPL PVLACLALLG GSARADSSGL PEPPRSVPSD AVVPPAVPDG TSDAVAARVD
TYLRLLSPLG GDIDEYLSFL DQTPTWPRRA VMLGRLQRLM AVAAPGVPGM AQACATLTLT
YAPALAACAR QPVPAPDLPA RARHAWTEGV DQMEDEAAFL AAFAPVLTPA DQWHRFMRQE
LTGHLDAAQR QVARVDIGRQ ALARARLSLR MGWSDTPALL ALVPPALSDD PVLVLDRIRW
LRRSGQADLA AALWAQSGPA AEQRVADPAF AAAIKAAFWA ERDALAHDMM LAGRDKEALA
LATASDDMAP TDRNAARFLS GWILLQHDHD PHAALARFRP LCDASSLLTR SRGLYWTGRA
LSDLGDRDGA RTAWGQAAAL PGTFYGQMAA SRLAGDTASP LLFPERSGDL VRSRLGAIPG
PVWTPDDKAR FDASDLVQAA RLLAARHDLG HARDFLLLQD TRTGGTAGHV LAATLALQLG
LPDVAVSIAR RAGREGTALL PLGWPVPFSP ALSSVPGEGL PPGFLMAVIR QESGFDPGIV
SPAGAYGLMQ LMPAAARDVS RQARLATGPL TGARLTDPDL NIRIGSAYLV RLMQKFGGAV
PYVLAAYNAG PHRADEWLAL LGDPARGTPT ADAMLDWIES IPFAETRSYI QRVEENMAIY
QALAASAQAE AAP
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