Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0174 |
Symbol | |
ID | 6973566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 189656 |
End bp | 191974 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643389707 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_002274588 |
Protein GI | 209542359 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.191382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGGA AAGATCGAAA AGGCGGGCAA CCATTTACCA TGGCTGGAGT TGGCCTCGTC CTGCTCTCTT CCGTATCGCA GGCTGCTGAA AGTAAATCGA CAACCAAGCC CCGTCCCGTC CTGTCCGGCC CGCAGCAGCA TGCCTCGGCA CCCAAATCCA AGCCCGCGGC TCCAGCCACA CCTGTCCCGA CGGCACAACA TATCCTGGTT ACGGGGCGCA CCGTTTCCGG TGCCACAGCC GATTACAACA AGAAGACGGC CTATCTCGGT CCCCTTGGCA ACAGGAGCAT TTTGGATACG CCGATGTCGA TCCAGTCCGT GCCGCACGAT GTCATGGTCA ATCAGCAGAC GCGCAACCTG AACGACCTGA TGGGCTACAT GTCTTCGGTG CAGCTGGAAG TGCGCGGCGA CCCGAACACC AGTCGCCCGC AATCGCGCGG TTTCGAGGCC GATGTCATCG CCAATACCCG CCTCGACGGG CTGAATATCG TTTCGACCAC GCCGTACGCC GCCGAAATGT TCGAGGACGT GCAGGTTCTC AACGGTGTGG CCGGTGCGCT CTACGGGGCG CAGAACCCGG CCGGCACCTT CGCCTTCTCG ACAAAACGTC CGACCGATAC TCCGATCAAT CGCCTGACCG TCGGCGTCGA TTCAATCGGC ACGCTGATGG AAAATGCCGA CGTGTCCGGC CGGATCGGCA AGAACAAGTG GTTTGGTTAC CGGATCAACC TGTTGCATGG CGACGGCACG ACCTATGTGC AGAACAGTTG GATGCGCCGC AACCTGGTCA GCGCGGATTT CGACATCCAT TTCGATCCGG ACACGGTCCT GGAACTCGAC GCTTCCCACT ATACCTATGT TCAGCGTGGA ACGACGCCGG GATTCAACCT TGCGTATAAC GCGACGTCGC TTCCGCCGGC GCCCGATCTC AGCAAGCCCA ACCTGGGGCA GGACTATGCC GGTTACAATA TGGAAACGAA CCTGTTCATG GCGAAGATAA AACATACCAT CAACAGGGAC TGGAGCTTCA CCCTCGGGGG CAACTACGAG GATTCGATCC GCCAGGTCTT CAGCAACACC AATACCCTGA CGACCGGGCC TGTCGGTGAA TATACCCAGA CCATCGCGGC GGCGGTCACC GCCAACGATT TCCGCTCCGG CGCCAATCTT GCCTACGTCA ACGGGCACTT CCACACCGGT TTCATCACGC ATGATATCGT GGCCGGCACG AACGGCTACA TGATGGGCAA TTACAATCCC ACGCAGGGCG AGACGATTGC CCTGGGCAAG TCCAACATGT ATTCGCCATC CGTCCTGTCC GGGTCGCAGC CCTATTATCA CGGGCGTTAT GAATCGGCCT ATATCCGCAA CCAGGCGATG ATCCTGGGCG ACACCCTGCA CCTGGACCGC CACTGGTCCA TCGTCGGCAC GCTGACCTGG AACTGGCTGA GCCAGGATAA TCGCTCAACG AAGTCAAGGA CGGTCAAGGA CGGCAACACC ACCTATTCGT ACACCACGCC GCTCGGCTGG ACGAGCAAGC ATATCGACGG GGCCTTCAGC CCGATGGCGA GCCTGGTGTA CAAGCCCGCC GAAAACCAGA CGGCCTATTT CACCTATGGC CGCGCCATCC AGGCGGGTGT CCAGGCACCG GCGTCCGCCG CGAATGCGAA CCAGATGACC CAGCCGTTCC GCAGCGAGGA ATATGAGGTC GGCTACAAGA TCAGCTATCA GAAGATGCTG TTCAGCGTCG CGGGATTCCG CATGAATCGC CCTTACGCCT ATCAGGACGC GAACGGATAT TTCGGCACCT TCGGCATGCA GACCAACTAT GGCGTCGAGG TCCAGGCGCA GGGACGCATC ACGCCCGACC TGTCCGTCCT GGCCGGCATG ACCTGGCTTG ACGCCGAACT GGGCGGTACC GGCAATGCCG CCACCAATAA CAAGGAGGTC GTGGGCGCCC CGCCGGTCCA GGCGAACATC CTGCTGGATT ACCGGCTGCC CATCCCGCAC GGTGCCTTTG CGTCCGGCCT GGCCGTCAAC GCGAATGTCC ATTACACCGG TCGTCGTGCC GCCACCATAA CGAATTCGGC CTATGCCGAC GCATACGCCA CGCTGGACCT GGGCATTCGT TATCCCTTCT TCGCGGCGCA TCACCCCTGG GCGGCCCGCT TCGGCGTGAC CAATGTCGCG AATACGCAGT ACTGGTCATC CCTCTATCCT GCGAGCAACA ACGGTTCGCT GAACAACGAC ACCGGGGCCA GCAGTATTTA TGCCGGCCTG CCGCGCATGT TCCACTTCAC GTTGGAGGCC GATTTCTGA
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Protein sequence | MSRKDRKGGQ PFTMAGVGLV LLSSVSQAAE SKSTTKPRPV LSGPQQHASA PKSKPAAPAT PVPTAQHILV TGRTVSGATA DYNKKTAYLG PLGNRSILDT PMSIQSVPHD VMVNQQTRNL NDLMGYMSSV QLEVRGDPNT SRPQSRGFEA DVIANTRLDG LNIVSTTPYA AEMFEDVQVL NGVAGALYGA QNPAGTFAFS TKRPTDTPIN RLTVGVDSIG TLMENADVSG RIGKNKWFGY RINLLHGDGT TYVQNSWMRR NLVSADFDIH FDPDTVLELD ASHYTYVQRG TTPGFNLAYN ATSLPPAPDL SKPNLGQDYA GYNMETNLFM AKIKHTINRD WSFTLGGNYE DSIRQVFSNT NTLTTGPVGE YTQTIAAAVT ANDFRSGANL AYVNGHFHTG FITHDIVAGT NGYMMGNYNP TQGETIALGK SNMYSPSVLS GSQPYYHGRY ESAYIRNQAM ILGDTLHLDR HWSIVGTLTW NWLSQDNRST KSRTVKDGNT TYSYTTPLGW TSKHIDGAFS PMASLVYKPA ENQTAYFTYG RAIQAGVQAP ASAANANQMT QPFRSEEYEV GYKISYQKML FSVAGFRMNR PYAYQDANGY FGTFGMQTNY GVEVQAQGRI TPDLSVLAGM TWLDAELGGT GNAATNNKEV VGAPPVQANI LLDYRLPIPH GAFASGLAVN ANVHYTGRRA ATITNSAYAD AYATLDLGIR YPFFAAHHPW AARFGVTNVA NTQYWSSLYP ASNNGSLNND TGASSIYAGL PRMFHFTLEA DF
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