Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0133 |
Symbol | |
ID | 6973525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 146879 |
End bp | 147937 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643389667 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_002274548 |
Protein GI | 209542319 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.899957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.134277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTGT CGGATGACGC AATGTTTCGG ACCGCCGCGC GCGCGCGGCT GGACCGCCTG TGGTCCGCCG GCACGGCCTT CCTGGGCAGC GAGGTCGCGA TCCTGGGCGG CGCCATGTCC TGGGTCAGCG AGCGCCATCT GGTATCGGCC ATTTCCAACG CCGGCGGCTT CGGCGTGCTG GCCTGCGGCG CCATGGAACC CGACCGGCTG GCCGAGGAAA TCGCCGCCAC CCAGGCGCTG ACCAGCCGCC CCTTCGGCGT CAACCTGATC ACCATGCACC CACGCCTGGA CGACCTGATC CAGGTCTGCC TTTCGGCCGG GGTCACGCAT GTCGTGCTGG CCGGCGGCAT TCCGCCGGGG CCGGCCATCC GCGCGATCAA GGATGGCGGG GCGCGGGTCG TGGCGTTCGC GCCGGCCCTG GTGCTGGCCA AGCGGCTGGT GCGCATGGGC GTCGATGCCC TGGTGATCGA GGGCGCGGAG GCCGGCGGGC ATGTCGGCCC GGTCTCGCTG ACCGTCCTGG CGCAGGAAGT GCTGCCCCAT ATCCGCTCGG TTCCCGTCTT CGTCGCGGGC GGGCTGGGAC GGGGCGAGGC CATCCTGTCC TATCTGGAGC AGGGGGCGGC CGGCGCGCAG CTCGGCACCC GCTTCGCCGC GTCGGCCGAA AGCATTGCCC ACGAACGGTT CAAGGCCGCG TTCGTCCGCG CCAACGCCCG CGACGCCGTG ACGTCGGTCC AGCTTGACGA ACGCTTCCCC GTCATTCCGG TGCGTGGCCT GTCGAACGAG GGCGGACGCG CCTTCCTGCG CCATCAGGCG GAAACGATCC GCCGCTACCT GGACGGCGAA CTGACGCGTG AGGCCGCGCA ACTGGATATC GAGCATTTCT GGGCCGGGTC GCTGCGCCGG GCGGTGATCG AGGGCGACGT GGAACAGGGT TCGGTCATGG CCGGCCAGTC GGTCGGCATG ATCTCCTCCG TCCAGCCGGT CGCGGCCATC ATCGCCGAAC TGGTCGAACA GGCGGTCGAT GCGCTGGTTC GGCGCGACAT GCCGGCGGGG GATGCGTGA
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Protein sequence | MPLSDDAMFR TAARARLDRL WSAGTAFLGS EVAILGGAMS WVSERHLVSA ISNAGGFGVL ACGAMEPDRL AEEIAATQAL TSRPFGVNLI TMHPRLDDLI QVCLSAGVTH VVLAGGIPPG PAIRAIKDGG ARVVAFAPAL VLAKRLVRMG VDALVIEGAE AGGHVGPVSL TVLAQEVLPH IRSVPVFVAG GLGRGEAILS YLEQGAAGAQ LGTRFAASAE SIAHERFKAA FVRANARDAV TSVQLDERFP VIPVRGLSNE GGRAFLRHQA ETIRRYLDGE LTREAAQLDI EHFWAGSLRR AVIEGDVEQG SVMAGQSVGM ISSVQPVAAI IAELVEQAVD ALVRRDMPAG DA
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