| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0126 |
|---|
| Symbol | |
|---|
| ID | 6973518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011365 |
|---|
| Strand | + |
|---|
| Start bp | 141012 |
|---|
| End bp | 141794 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643389660 |
|---|
| Product | putative phosphoribosyltransferase |
|---|
| Protein accession | YP_002274541 |
|---|
| Protein GI | 209542312 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0837099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.0454325 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCC GCCTGGGGTC GCTTCTGCTG GATGGTCTTC TGCCACCCGA CTGCCCCCTG
TGTCACCAGC CGGTCGAGCG GGCGGGCCTG CTGTGTCCGG ACTGCTTCCG GCATATGCGC
TTCATTTCCG AACCCTGCTG CGATGCGTGC GGCGAACCCT TTGCCGGCGC GGGGTTCGCC
GGGTCGGTCC TGGGTGGGGC GGGGCGCATC TGCGCATCCT GCGCGGACCG GCGGCCGCCG
TGGCGGGCCG GGCGGGCGGC GCTGGTCTAT GACGAATGGT CGCGTGCGCT GATCCTGCGC
CTGAAATATG CCGACCGGAC CGAGCTTGCG CCCCTGCTTG GCCGCCACAT GGCGCGGATC
GGCCAGGGGA TGCTGGGCCA GGCGGACCTG CTGGTGCCCG TGCCGCTGCA CCGTCGCCGG
CTGTTTCGCC GCCGCTACAA CCAGGCCGCC CTCCTGGCGC GGGCGGTGGG GCGGACCGTG
GGGCTGCGGA CCCTGCCCGA TGCGCTGATC CGTCCGCAGG CGACGCCGCC GCTGGCGCGG
CTGGGCCCGG CCTCGCGTCG CGATATCCTG CATGGCGCGA TCGCGGTCCG CCCGTCGCGG
CGGGCCGCGA TCGCGAACCG GCGAATCGTC CTGGTAGACG ATGTCATGAC CACGGGGGCG
ACGACGGGCG AATGCGCGCG GGTCCTTCTT GCCGCCGGGG CGGCATCGGT GGACGTGCTG
GTGGCGGCCC GCGCGCCCGA TCCCGGCCGC GATCCGTCCC AGGATACGGG GCAGCACCCG
TAA
|
|---|
| Protein sequence | MARRLGSLLL DGLLPPDCPL CHQPVERAGL LCPDCFRHMR FISEPCCDAC GEPFAGAGFA
GSVLGGAGRI CASCADRRPP WRAGRAALVY DEWSRALILR LKYADRTELA PLLGRHMARI
GQGMLGQADL LVPVPLHRRR LFRRRYNQAA LLARAVGRTV GLRTLPDALI RPQATPPLAR
LGPASRRDIL HGAIAVRPSR RAAIANRRIV LVDDVMTTGA TTGECARVLL AAGAASVDVL
VAARAPDPGR DPSQDTGQHP
|
|---|
| |