Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_0115 |
Symbol | |
ID | 6973506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | - |
Start bp | 130556 |
End bp | 132457 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643389648 |
Product | cobalt chelatase, pCobT subunit |
Protein accession | YP_002274530 |
Protein GI | 209542301 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.102217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0675463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGACC GCAAGGACAC CACCCAGTCC GCACGATTGG CCGCCGCCGA GCGGGCCGAC GTCTTCAAGC GCGCGACCGT TGGCGCGCTG CGCGCGCTGG GCGGCCGGGC GACGGCCGAG GTCACGTTCC AGACCGGCCC GATTCCGCCT GCGGCGGCGG TCAGCGGCGA TCACGTCCGC CTGCCGCAGC CCGCCCTGCA ACTGGCCGAG GCCGATATCC GGCGCGTGCG CGGCGCGGCG GATGCCGTGG CGCTGCAACT GCGCCATCAT GACGTGACGA TCCACAACGC GACCCGGCCG GAGCAGGCCG ATGCCCGGCT GGCCTATGAC GCGCTGGAAC AGGCGCGGGT CGAAAGCTTC GGCGCGCGCC ACATGGCGGG AGTCGCCGCC AATCTGCGGA ATCAGGCCGA GCGGGACTAT CACGACAGGG GTTATGACCG GGCGCAGGCG CGCGACCAGA TTCCCGTGCA GGTTGCGCTG TCGCTGCTGG CGCGCGAACG CATGACGGGC GAGCCCGTGC CCGAGAGCAT GCGCGCGATG GCCGAACAGT GGCGTGCGCA TCTGGGCCCC TCGGCACTGC GCGCGCTGGA CGACATGGCC GCCCATCAGG ACGACCAGAT GGCGTTTTCG CGTGCCGCGA AGCGGCTGCT GGTCGCCTGC GAACTGATCG AGGGCGAGGC CGAGATCGAG GAGGACGAGG ACGGCGACGA CAGCGCCCCC TCGGACGAGA CCGAGGAAGA ACCGGGCGAA GCGCCCGAGA AGCCGCAGCC GCAGGACGAG GACGCCAGCG GCCAGCAGGA AGACGAGACC GGCCTGCAGC CCCAGTTGGC GCAAGGTGCG GGAGCCGGCG ACGACAACCC CGACGAGTCC GAACCCGGCG GTACAGCGGG GTCCGAGGAA GCGGGCGGCC CACGCGGCAC GGACGATCAG GAAGCGACCG ATCCGGCGTC CCTGTATCAT GCCTTCACCA CCGCGTTCGA CGAGGAAATC GCGGCCGAGG ATCTGTGCGA CGCCGACGAA CTGGCCCGCC TGCGCCAGCA GTTGGACCAC CAGTTGCTCA GCCTGCAGGG CGTGGTGTCG CGCCTGGCCA ACCGGCTGCA ACGACGCCTG CTGGCACAGC AGACGCGGGC GTGGGAGTTC GACCTGGAGG AAGGCATCCT GGATGCCGGC CGGCTGTCGC GGGTGGTGGT CAACCCGACG CTGTCGCTGT CCTACAAGCA CGAACGCGAC ACCGATTTCC GCGACACGGT CGTGACCCTG CTGATCGACA ATTCCGGATC GATGCGCGGC CGGCCGATTT CGGTGGCCGC GATGTGCGGC GACATCCTGG CCCGCACGCT GGAACGCTGC GCGGTGAAGG TCGAGGTCCT GGGCTTCACC ACCCGGGCCT GGAAGGGCGG GCAGAGCCGC GAGCGCTGGG TGGCGCAGGG CAAGCCGGCC AATCCGGGGC GGCTGAACGA TCTGCGGCAC ATCATCTACA AATCGGCGGA CATGCCGTGG CGCCGGGCGC GGAAGAATCT GGGCCTGATG CTGCGCGAGG GGCTGCTGAA GGAAAATATC GACGGCGAGG CCCTGCTGTG GGCCTGGCGG CGCCTGCAGG GCCGGCCGGA AAGCCGGAAG ATCCTGATGG TGATCTCGGA CGGCGCGCCG GTGGATGACA GCACGCTGTC GGTCAATGCC GGGTCGTATC TGGAAACGCA CCTGCGGCAG GTGATCGCCC AGATCGAAAA CCGCAGCGGC GTCGAACTGG TGGCCATCGG GATCGGCCAT GACGTGACGC GCTATTACCG CCGCGCGGTC ACGATCTCCG ACGCCGAGGA ACTGGGCGGC ACGATGATGC AGAAGCTCTC CGAACTTTTC GATGAAAAGG TCGCTGTCGC GGGTCGCCGC CGAATCGCCT GA
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Protein sequence | MRDRKDTTQS ARLAAAERAD VFKRATVGAL RALGGRATAE VTFQTGPIPP AAAVSGDHVR LPQPALQLAE ADIRRVRGAA DAVALQLRHH DVTIHNATRP EQADARLAYD ALEQARVESF GARHMAGVAA NLRNQAERDY HDRGYDRAQA RDQIPVQVAL SLLARERMTG EPVPESMRAM AEQWRAHLGP SALRALDDMA AHQDDQMAFS RAAKRLLVAC ELIEGEAEIE EDEDGDDSAP SDETEEEPGE APEKPQPQDE DASGQQEDET GLQPQLAQGA GAGDDNPDES EPGGTAGSEE AGGPRGTDDQ EATDPASLYH AFTTAFDEEI AAEDLCDADE LARLRQQLDH QLLSLQGVVS RLANRLQRRL LAQQTRAWEF DLEEGILDAG RLSRVVVNPT LSLSYKHERD TDFRDTVVTL LIDNSGSMRG RPISVAAMCG DILARTLERC AVKVEVLGFT TRAWKGGQSR ERWVAQGKPA NPGRLNDLRH IIYKSADMPW RRARKNLGLM LREGLLKENI DGEALLWAWR RLQGRPESRK ILMVISDGAP VDDSTLSVNA GSYLETHLRQ VIAQIENRSG VELVAIGIGH DVTRYYRRAV TISDAEELGG TMMQKLSELF DEKVAVAGRR RIA
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