| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0094 |
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| Symbol | |
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| ID | 6973484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | - |
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| Start bp | 106851 |
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| End bp | 108659 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643389626 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002274509 |
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| Protein GI | 209542280 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.666294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.206481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCG TCTTTTTTAT CAGGAACACA CTATCGACCC TGCTGTTCTG CGTCATCTGG
AGTATCTGCG CGCTCGCCAG CGTCACCTGG ACCCGTCACG GCGGAAGCGT CTCGATGATC
TGGCCGGCCA ATGCGATCCT GGTCATGGCC ATCCTGCGCA TGCCCGCCTT CGACCACCGG
ATCTATCCCC CGCTGCTGTT TGTGCTGTCC AGCCTGGTCA ATCTGCTGGA TGGCCGGGGA
TGGACCACCA GCGTCGGTTT CAGCGTGGCG AACACGGTCG AGGTCATGAT GGCGGCCGTC
CTGGTCCACC GGATCAGTCC GGTGTCGGGC TTCTTCGAAC AGGTCGACTG GGCGTTCCGG
TTTGCGATCG CGATCTTCGT GTCCGTCGCA TGCTCGTCGG TCATTGCCGG AGGGGCGCTG
TTCCTTGGCG AAGGGCGCGA CTGGCTGGGG GGAAGCGCCA TCTGGATGAT GGCGCACCTG
CCCGGCCTGC TGATCACGGT TCCCATGCTG CTGGCCCTCA TGCCCGACGG CGAAGGGCGT
GAAATCCGGC GCAACGCCCC CCGGCGATTG ACGGTACTGG GCCTGATGGT CCTGGTGGCC
TGCATGTCGG TGGTCGTATT CGGGCAGTCG CGCTTTCCGC TGCAGTTCCT GCTGCTGCCG
CCCCTGTTGC TGGCGACCTT CCATCTCTAC GCCAAGGGGG CCGCGATGTC GGTCGCCATC
ATTACCATGA TCGGCAGTTT CTTCATGTTT ACCGGCGCGG GGGCCGTTAC CATGCTCCAC
GGGCCGGCCG CACTGAAGGT CTATGTCTTC CAGCTCGACC TGGCGACGAT CTTCTTCTGT
GCGTTGCCCC TGGGCGCCGT GCTGACCCAG CGCGACCAGA AGGCATCGCT GGCCCAGCAG
CGGCTGCAGG ATTTCCATCA TCTGGCCGAC CGGGTCGGCG ACGTACTGTT CCGCGTCGAC
GACGCGGGAT GCTGGAGCTA TCTCAACCCG GCCTATGAAC AGATGTCCGG CATTTCGGTG
GACAAGCGGC TGGGTCAGCC CATGCTGGAC GCCGTCGTGA TCGAGGACCG CGCCGCCCTG
GCCCAGGCGC AGGCCGAATT GCAGTCCGGC AGCCGCGACG ACCTGCGCCA GGTCGTCAGC
ATCTATCGCC GCGACGGAAC CGTCCGGCAT GTCGAAATCC TGGCCCACCG GCTGGGCGAG
GGCGAAGGGT TTGGCGGCCT GATCCGCGAC GTGACGGACC AGTTGACGCT GGACGCGCAC
AATCGCCAGA TCGCCGCCGC CTATGAACAG GCCGCCAACA CCGACGAACT GACCGGCCTG
CCCAATCGAC GCGCCTTCTT TCAGGTGCTG GACGGGCAGA TGGCTGCGGC ATCCTCGGTG
GTCGCGGCGG CGATGCTGGA CCTGGACCAT TTCAAGTCGA TCAACGACAA GTACGGCCAC
CCCATCGGAG ACATCGTCCT GCGCCGCGTC GCCACGGTGG TGCGTGCGAC CCTGCGGGAC
ACCGACATGG TCGCACGGAT CGGCGGCGAG GAATTCGCGG TCCTGATCAC GAGCGAAAGC
CGCGACCGGG CGATCAGCCT GATCCGCCGG GTGGTGCGCG CGGTATCGGC GGAATCGATC
GACCTGCCGA CCGGGGTGCG GTTGCAGGTC ACGATCAGCG CGGGCATTGC CTGCCGCGAG
GCGGGGGAAG ACCGCAACGC CCTGATGTCC CGCGCCGACC AGGCCCTGTA TGTCGCCAAA
CGGACCGGCC GCAACCGGCT GACCATCGCC GATGCATCCA CGGCGGCAAC ACAGGCCGCG
ACCCCGTAA
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| Protein sequence | MTGVFFIRNT LSTLLFCVIW SICALASVTW TRHGGSVSMI WPANAILVMA ILRMPAFDHR
IYPPLLFVLS SLVNLLDGRG WTTSVGFSVA NTVEVMMAAV LVHRISPVSG FFEQVDWAFR
FAIAIFVSVA CSSVIAGGAL FLGEGRDWLG GSAIWMMAHL PGLLITVPML LALMPDGEGR
EIRRNAPRRL TVLGLMVLVA CMSVVVFGQS RFPLQFLLLP PLLLATFHLY AKGAAMSVAI
ITMIGSFFMF TGAGAVTMLH GPAALKVYVF QLDLATIFFC ALPLGAVLTQ RDQKASLAQQ
RLQDFHHLAD RVGDVLFRVD DAGCWSYLNP AYEQMSGISV DKRLGQPMLD AVVIEDRAAL
AQAQAELQSG SRDDLRQVVS IYRRDGTVRH VEILAHRLGE GEGFGGLIRD VTDQLTLDAH
NRQIAAAYEQ AANTDELTGL PNRRAFFQVL DGQMAAASSV VAAAMLDLDH FKSINDKYGH
PIGDIVLRRV ATVVRATLRD TDMVARIGGE EFAVLITSES RDRAISLIRR VVRAVSAESI
DLPTGVRLQV TISAGIACRE AGEDRNALMS RADQALYVAK RTGRNRLTIA DASTAATQAA
TP
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