Gene Gdia_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0068 
Symbol 
ID6973457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp76832 
End bp77440 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content72% 
IMG OID643389601 
Productprotein of unknown function UPF0054 
Protein accessionYP_002274485 
Protein GI209542256 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0317437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGC GAAGTAGCCA GAATCCCGCC GAATCCGGCG GGGTCCTTAC GATAGAGCCG 
ACGGCCGGAC GCGCCGTCGG CCTTCCCCCT GTTCCGCTCC ACGAGTGGGA CGTCCCGGCC
GGGGACGGCG GCGATGACTG CGATGTCGTC GTGACCGACG CGCGCTGGCA TGGCGCCGTG
CCGGGCATTG CGGCCCTGGT CCGGCGCACC GCGCGCGCGG CCTGGGGCGG TGACGCACCG
GGGCCCGTCA CGATCATGCT GGACAATGAC CGCGCGATCC GCCGGTTGAA CGCCCGGCAT
CGCGACCGGA ACAAGCCGAC CAACGTCCTG ACCTTCGACT ATCCCGGCGG CCTGCCGGGG
GGCGACATCA TGATCGCGCT GGAAACCGTG CGGCGCGAGG CCCAGGCGGC CGGCCGGCCC
ATCCGCCACC ACCTGATGCA CCTGGTGGTG CACGGCATCC TGCACCTGCG CGGCCACGAC
CATCACCAGG CCGGCGAGGC CCGGCGGATG GAAATGGAGG AAGCCCGGAT CCTGGGCCGC
CTGTCGGTGC CCAATCCCTG GAAATACCGC CCCGGCGCAC CGTCGGGGCT GATGGGGGAC
GGGCAGTGA
 
Protein sequence
MEPRSSQNPA ESGGVLTIEP TAGRAVGLPP VPLHEWDVPA GDGGDDCDVV VTDARWHGAV 
PGIAALVRRT ARAAWGGDAP GPVTIMLDND RAIRRLNARH RDRNKPTNVL TFDYPGGLPG
GDIMIALETV RREAQAAGRP IRHHLMHLVV HGILHLRGHD HHQAGEARRM EMEEARILGR
LSVPNPWKYR PGAPSGLMGD GQ