Gene Gdia_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0045 
Symbol 
ID6973434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp51623 
End bp52435 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content66% 
IMG OID643389578 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_002274462 
Protein GI209542233 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.278915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0499995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGCA ATGCCACACA TATGCGCATC GTCACGTGGA ATATCAATTC GCTTCGGCTG 
CGGCTGCCGC TGCTGGCCCG GCTGGGCGCG GAGCTGCGGC CCGACATCAT CTGCCTGCAG
GAGACCAAGG TCCCCGACGA CCTGTTCCCC GCCGATGCGA TCCGCGACCT GGGCTATGTC
CATATCCAGC ATCGCGGGAT GAAATCCTAT AACGGCGTCG CCATCCTGTC GCGCGTTCCG
CTGACCCCCC TGGACGACAC GCCGGACTGG TGCGCCCGCA GCGACTGCCG TCACATCGCG
GCCTCGTTCC CCATGGGGGG GCGGCCGGTG GAACTGCATA ATTTCTACGT GCCCGCCGGT
GGCGACATCC CCGACCCGGA TGCCAACCCA AAATTCGCCC ACAAGCTGGC TTTCGTGGAC
GAAGCCACGT CCTGGTTCAC GGGCCGCACC AGCCACCGCA CCATCCTGGT GGGTGACCTG
AACATCGCCC CGCTGGAACA GGATGTGTGG AGCCACAAGC AGCTGCTGAA CGTGGTCAGC
CACACCCCAC CGGAAGTCAC GCGGCTTATG GCGTGGCAGG CCTGCGGCTT CGTCGATGCG
ATGCGCCATT TCGTGCCGCC CGACGAGAAG CTGTATACGT GGTGGTCCTA CCGCAACCGC
GACTGGAAGG CCTCCAATCG CGGCCGCCGC CTGGACCATG TCTGGATCAC GCCCGACCTG
ACGGCGGCGC TGAAGGACAT GACGGTGCTG CGCGAGGCAC GGGACTGGCC CACGACGTCG
GACCACGTGC CCGTCGCGAT GGATTTCGCC TGA
 
Protein sequence
MIGNATHMRI VTWNINSLRL RLPLLARLGA ELRPDIICLQ ETKVPDDLFP ADAIRDLGYV 
HIQHRGMKSY NGVAILSRVP LTPLDDTPDW CARSDCRHIA ASFPMGGRPV ELHNFYVPAG
GDIPDPDANP KFAHKLAFVD EATSWFTGRT SHRTILVGDL NIAPLEQDVW SHKQLLNVVS
HTPPEVTRLM AWQACGFVDA MRHFVPPDEK LYTWWSYRNR DWKASNRGRR LDHVWITPDL
TAALKDMTVL REARDWPTTS DHVPVAMDFA