Gene Gdia_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGdia_0042 
Symbol 
ID6973431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGluconacetobacter diazotrophicus PAl 5 
KingdomBacteria 
Replicon accessionNC_011365 
Strand
Start bp48081 
End bp49904 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content68% 
IMG OID643389575 
Productsodium/hydrogen exchanger 
Protein accessionYP_002274459 
Protein GI209542230 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.126585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.101979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATA ATCTGGCCAT CGGGATCTTA TGCGTGCTGG GCGGCGGAAT CGGCGCCCAA 
TGGGTAGCGT GGCGATTCCG GCTGCCGGCC ATCGTCCTGC TGTTCGCGCT GGGGCTGCTG
TACGGGCCGG GGCTGAACCT GCTGCATCCG TCGGCCGCGA TCGGCGGCTA TTTCCATCCC
ATCGTCTCGC TGGCCGTCGC CTTCATCGTG TTCGAAGGCG GGCTGGGGCT GGATTTCCGG
CAATGGCGCG CGGCGGGCGA GGGCGTGCTG CGCCTGACGG TCGTGGCCCT GCCGATCAAC
TGGATCCTGG GCGCGCTGGC GGCGCATTTC GTCGGGCATC TGCACTGGGG CGCATCCTGG
CTGTTCGGCG CCATCATCGT GGTGACGGGG CCGACGGTGG TGCTGCCGCT GCTGCGCCAC
ACCAAGCTGC GCCCCCGGGT GGCGGCCTTC CTGCGGTGGG AGGCCATCCT GAACGACCCG
GTGGGCGCGA TCCTGGCGAC GCTGGTGCTG GAATTCCTGA TGATCCAGGG CAACCGGCAT
TCGGGCATGT TCATGGCCGA AATCGTGCCC CACCTGCTGT TCGCCACCAT GATGGCGCTG
GGCTGCGGGG TGTTTCCGGC CGTGCTGGTG CGGTTTCTGT CCACCCGCGA CCTGATCCCG
GAAATCCTGC GCATTCCCAT CATCCTGACG CTGGCGATGA GCGTCTTCGC GGTCTGCAAC
TTCGTCATGG AAGGGGCGGG GCTGATGGCC GCCACGGTCT TCGGCATGGC GCTGACGAAC
ATGCACGTCA TCGGCATGTC CGAACTGCGG CGGATCAAGG AATCGCTGGG CGTGCTGGTG
GTGTCGTGCC TGTTCGTGAT GCTGACCGCC GATCTGCATC GCGCGGTGCT GGAACGCCTG
TCGCTGCCGA TCGTGGCGAT GACGCTGACC GTGCTGTTCG TGGTGCGGCC GGTGGGTATC
CTGCTGTCCA CCATCCGCGC CAACCTGTCG TGGCAGGAAC GCCTGTTCGT CGGCTGGATC
GCGCCGCGCG GGATCGTGGC CGCCGCCGTC GCCGGCGTCG CCGGCCTGCA ATTGCAGGAA
GCCGGCTATC CCAGCGCCGA CCTGGTGACG CCGGGCGTGT TCGCCCTGAT CGCCACCACC
ATGATCCTGC ATGGGTTTTC GCTTCGCCCG CTGGCGCGCG CGCTGCGCCT GACCCTGTCC
GACGAACCGG CGCTGGCGAT CGTCGGCGCC AGCGCCTGGT CCACCGACCT GGCCGGCGTG
CTGCATCGCC TGGGGTGCCC GGTCATGCTG GTGGACACCT ATACCGGCGC GCTGGCCCCC
GCGTCACGCG CCGGCATCCC GATCCTGAAG GCGGAACTGC TGTCCGACGA AGGGCTGGAA
AGCCTGGAGG AACGGCCGGC GGACTATCTG ATCGCGGCGA CGCCGGACGC GATCTACAAC
GGACTGGTCT GCGCGCGGCT GGCGCCGGAT TTCGGGCGCC AGCGCGTGTT CCAGGTCAGC
CCCGGCGTGG CGCGGCTGGA TCTGTACCGG GGGTTGAGCC GCGATTCACG GGGCAGGGTT
CTGGGCGATC CGGCATGGAA CTTCACGCTG TTCGATACCC TGTTCGAACG GGGCTGGCGC
TTTCGCAGCA TCCCCTTCGC GCCGCCGCCG GCCGGCGGCG CGGCAGGCGG GACGCCGCCC
CCGGGCGAAC CCCTTGCCGA AGGCAATCGC CTGATGATCA TGACCGTGCG CAAGGGCGTT
GCCATCTGGA TTCGGTCGGC CGAGGACGAG GTGCCGGTCG AGCCGCTGGC CGGAGATACG
ATCATCATCA TGTCGCCCCC GTGA
 
Protein sequence
MQDNLAIGIL CVLGGGIGAQ WVAWRFRLPA IVLLFALGLL YGPGLNLLHP SAAIGGYFHP 
IVSLAVAFIV FEGGLGLDFR QWRAAGEGVL RLTVVALPIN WILGALAAHF VGHLHWGASW
LFGAIIVVTG PTVVLPLLRH TKLRPRVAAF LRWEAILNDP VGAILATLVL EFLMIQGNRH
SGMFMAEIVP HLLFATMMAL GCGVFPAVLV RFLSTRDLIP EILRIPIILT LAMSVFAVCN
FVMEGAGLMA ATVFGMALTN MHVIGMSELR RIKESLGVLV VSCLFVMLTA DLHRAVLERL
SLPIVAMTLT VLFVVRPVGI LLSTIRANLS WQERLFVGWI APRGIVAAAV AGVAGLQLQE
AGYPSADLVT PGVFALIATT MILHGFSLRP LARALRLTLS DEPALAIVGA SAWSTDLAGV
LHRLGCPVML VDTYTGALAP ASRAGIPILK AELLSDEGLE SLEERPADYL IAATPDAIYN
GLVCARLAPD FGRQRVFQVS PGVARLDLYR GLSRDSRGRV LGDPAWNFTL FDTLFERGWR
FRSIPFAPPP AGGAAGGTPP PGEPLAEGNR LMIMTVRKGV AIWIRSAEDE VPVEPLAGDT
IIIMSPP