| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gdia_0024 |
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| Symbol | |
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| ID | 6973413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gluconacetobacter diazotrophicus PAl 5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011365 |
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| Strand | + |
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| Start bp | 28394 |
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| End bp | 29386 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643389557 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_002274441 |
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| Protein GI | 209542212 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.567632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0161595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAC GACGTGACTT CCTGATGTCA GCCTCGGCCA CCTGCGCGGC CGGTGGCATC
GGCATGGCCG CGTCGGCGCG GGCCGACAGC GCCCCTGCTG CATCCTATGC GGCCTTCCTG
GCCGGGGTGC GGGCCGAGGC CGTTTCCCAT GGCCTGTCGG CCGCGATCGT CGATCGCGCC
CTGGCGCTGG AGGCGCCGAA CGCGCGCGTC CTGCAACTGG ACCAGCACCA GCCCGAATTC
ACCCTGACCT GGGCGCAGTA CCGACAGCGC GTGCTGACGC CCAAGAAGGT CGCCGACGGC
CGCGTGGCGG CGGGGGCACG GCGCGCGCTG CTGGCGGAGG TCGGCCGGCA TTTCGGCGTG
GACCCGCAGC CGCTGATGGG AATCTGGGGG TTGGAATCCG CCTACGGCAC GCGTACGGGC
ACCTTCCAGA TCCCCGACGC CCTGGCGACC CTGGCCTATG ACGGGCGGCG CGCGTCGTTC
TTTCGCGGCG AACTGATGAA TGCGCTGCGC ATCCTGGACC ATGGCGACGT CACGCCCGAT
TCCATGACCG GCAGCTATGC CGGTGCGATG GGACAGCCGC AGTTCATGCC CAGCGCCTAT
CTGCGCTACG CCGTCGACTA TACCGGCAGC GGCCGGCGCG ACATCTGGAC CAGCGAGCCC
GACGTCTTCG CCTCGATCGC CAATTACCTG GCCCGTTGCG GCTGGTCGGC CGGCGAGCCC
TGGGGCCAGG AAATCTCGGT TCCCACGCGG CTGGCGCAGG CCGATCTGGG GCGGGGCAGG
GTGCGTACCC TGGCCGACTG GATGGCGCAG GGCGTGCGGC GGCTGGACGG GCGGCGTTTC
TCGCGCCCCG ATATCAGCGG CGCGGTGATC CGGCCGGACG GACCGGGCGG CGAGGCCTTC
ATGGTCTATC GCAATTTTTC GGTCATCCGG CGCTACAATC CATCCGATTT CTACGCGCTG
GCGGTCGGGC TGCTGGGCCA CGACGTCACG TGA
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| Protein sequence | MIRRRDFLMS ASATCAAGGI GMAASARADS APAASYAAFL AGVRAEAVSH GLSAAIVDRA
LALEAPNARV LQLDQHQPEF TLTWAQYRQR VLTPKKVADG RVAAGARRAL LAEVGRHFGV
DPQPLMGIWG LESAYGTRTG TFQIPDALAT LAYDGRRASF FRGELMNALR ILDHGDVTPD
SMTGSYAGAM GQPQFMPSAY LRYAVDYTGS GRRDIWTSEP DVFASIANYL ARCGWSAGEP
WGQEISVPTR LAQADLGRGR VRTLADWMAQ GVRRLDGRRF SRPDISGAVI RPDGPGGEAF
MVYRNFSVIR RYNPSDFYAL AVGLLGHDVT
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