Gene ECH74115_5903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5903 
SymbolradA 
ID6969581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5556335 
End bp5557717 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content58% 
IMG OID643389518 
ProductDNA repair protein RadA 
Protein accessionYP_002273909 
Protein GI209397317 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1066] Predicted ATP-dependent serine protease 
TIGRFAM ID[TIGR00416] DNA repair protein RadA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAAAG CTCCAAAACG CGCCTTTGTT TGTAATGAAT GCGGGGCCGA TTATCCGCGC 
TGGCAGGGGC AGTGCAGTGC CTGTCATGCC TGGAACACCA TCACCGAGGT GCGTCTTGCT
GCGTCGCCTA CGGTGGCGCG TAACGAGCGT CTCAGCGGCT ATGCCGGTAG CGCCGGGGTG
GCAAAAGTCC AGAAACTCTC CGATATCAGC CTTGAAGAGC TGCCGCGTTT TTCCACCGGA
TTTAAAGAGT TCGACCGCGT ACTAGGCGGC GGCGTGGTGC CAGGAAGTGC CATTCTGATT
GGCGGTAACC CTGGTGCGGG GAAATCCACG CTGCTACTGC AAACGCTGTG CAAACTGGCC
CAGCAGATGA AAACGCTGTA TGTCACCGGC GAAGAGTCGC TGCAACAGGT GGCAATGCGC
GCTCATCGCC TTGGCCTGCC GACTGACAAT CTCAATATGT TGTCGGAAAC CAGCATCGAA
CAGATCTGCC TGATTGCCGA AGAAGAGCAA CCGAAGCTGA TGGTAATTGA CTCGATCCAG
GTGATGCATA TGGCGGATGT ACAGTCATCG CCTGGTAGCG TGGCGCAGGT GCGTGAAACG
GCGGCTTATT TGACACGCTT CGCCAAAACG CGCGGTGTGG CGATTGTCAT GGTGGGGCAC
GTAACCAAAG ATGGTTCGCT GGCTGGCCCG AAAGTGCTGG AACACTGTAT CGACTGTTCG
GTGCTTTTAG ATGGCGATGC CGACTCCCGT TTTCGCACCT TGCGCAGCCA TAAAAACCGC
TTCGGCGCGG TGAATGAGCT GGGCGTCTTC GCGATGACCG AACAGGGGCT GCGTGAAGTC
AGCAACCCTT CGGCAATTTT CTTAAGTCGC GGAGATGAAG TGACCTCCGG CAGCTCCGTG
ATGGTGGTGT GGGAAGGAAC GCGTCCGTTG CTGGTGGAGA TTCAGGCGCT GGTCGATCAC
TCGATGATGG CGAATCCGCG CCGCGTGGCA GTGGGGCTGG AACAAAACCG TCTGGCAATC
CTGCTGGCTG TCTTGCACCG TCACGGTGGT CTGCAAATGG CCGATCAGGA TGTGTTTGTG
AACGTGGTCG GCGGCGTAAA GGTAACCGAA ACCAGCGCCG ACTTAGCGTT ACTGCTGGCG
ATGGTTTCCA GCCTGCGTGA CAGACCGCTA CCGCAGGATC TGGTGGTGTT TGGTGAAGTC
GGGCTGGCAG GGGAGATCCG CCCGGTGCCC AGCGGTCAGG AACGAATCTC TGAAGCGGCG
AAACACGGTT TTCGCCGGGC GATTGTTCCG GCGGCTAACG TACCGAAAAA AGCGCCGGAA
GGGATGCAGA TTTTTGGCGT TAAAAAACTC TCCGACGCGC TTAGCGTGTT CGACGACTTA
TAA
 
Protein sequence
MAKAPKRAFV CNECGADYPR WQGQCSACHA WNTITEVRLA ASPTVARNER LSGYAGSAGV 
AKVQKLSDIS LEELPRFSTG FKEFDRVLGG GVVPGSAILI GGNPGAGKST LLLQTLCKLA
QQMKTLYVTG EESLQQVAMR AHRLGLPTDN LNMLSETSIE QICLIAEEEQ PKLMVIDSIQ
VMHMADVQSS PGSVAQVRET AAYLTRFAKT RGVAIVMVGH VTKDGSLAGP KVLEHCIDCS
VLLDGDADSR FRTLRSHKNR FGAVNELGVF AMTEQGLREV SNPSAIFLSR GDEVTSGSSV
MVVWEGTRPL LVEIQALVDH SMMANPRRVA VGLEQNRLAI LLAVLHRHGG LQMADQDVFV
NVVGGVKVTE TSADLALLLA MVSSLRDRPL PQDLVVFGEV GLAGEIRPVP SGQERISEAA
KHGFRRAIVP AANVPKKAPE GMQIFGVKKL SDALSVFDDL