Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5903 |
Symbol | radA |
ID | 6969581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5556335 |
End bp | 5557717 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643389518 |
Product | DNA repair protein RadA |
Protein accession | YP_002273909 |
Protein GI | 209397317 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAAAAG CTCCAAAACG CGCCTTTGTT TGTAATGAAT GCGGGGCCGA TTATCCGCGC TGGCAGGGGC AGTGCAGTGC CTGTCATGCC TGGAACACCA TCACCGAGGT GCGTCTTGCT GCGTCGCCTA CGGTGGCGCG TAACGAGCGT CTCAGCGGCT ATGCCGGTAG CGCCGGGGTG GCAAAAGTCC AGAAACTCTC CGATATCAGC CTTGAAGAGC TGCCGCGTTT TTCCACCGGA TTTAAAGAGT TCGACCGCGT ACTAGGCGGC GGCGTGGTGC CAGGAAGTGC CATTCTGATT GGCGGTAACC CTGGTGCGGG GAAATCCACG CTGCTACTGC AAACGCTGTG CAAACTGGCC CAGCAGATGA AAACGCTGTA TGTCACCGGC GAAGAGTCGC TGCAACAGGT GGCAATGCGC GCTCATCGCC TTGGCCTGCC GACTGACAAT CTCAATATGT TGTCGGAAAC CAGCATCGAA CAGATCTGCC TGATTGCCGA AGAAGAGCAA CCGAAGCTGA TGGTAATTGA CTCGATCCAG GTGATGCATA TGGCGGATGT ACAGTCATCG CCTGGTAGCG TGGCGCAGGT GCGTGAAACG GCGGCTTATT TGACACGCTT CGCCAAAACG CGCGGTGTGG CGATTGTCAT GGTGGGGCAC GTAACCAAAG ATGGTTCGCT GGCTGGCCCG AAAGTGCTGG AACACTGTAT CGACTGTTCG GTGCTTTTAG ATGGCGATGC CGACTCCCGT TTTCGCACCT TGCGCAGCCA TAAAAACCGC TTCGGCGCGG TGAATGAGCT GGGCGTCTTC GCGATGACCG AACAGGGGCT GCGTGAAGTC AGCAACCCTT CGGCAATTTT CTTAAGTCGC GGAGATGAAG TGACCTCCGG CAGCTCCGTG ATGGTGGTGT GGGAAGGAAC GCGTCCGTTG CTGGTGGAGA TTCAGGCGCT GGTCGATCAC TCGATGATGG CGAATCCGCG CCGCGTGGCA GTGGGGCTGG AACAAAACCG TCTGGCAATC CTGCTGGCTG TCTTGCACCG TCACGGTGGT CTGCAAATGG CCGATCAGGA TGTGTTTGTG AACGTGGTCG GCGGCGTAAA GGTAACCGAA ACCAGCGCCG ACTTAGCGTT ACTGCTGGCG ATGGTTTCCA GCCTGCGTGA CAGACCGCTA CCGCAGGATC TGGTGGTGTT TGGTGAAGTC GGGCTGGCAG GGGAGATCCG CCCGGTGCCC AGCGGTCAGG AACGAATCTC TGAAGCGGCG AAACACGGTT TTCGCCGGGC GATTGTTCCG GCGGCTAACG TACCGAAAAA AGCGCCGGAA GGGATGCAGA TTTTTGGCGT TAAAAAACTC TCCGACGCGC TTAGCGTGTT CGACGACTTA TAA
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Protein sequence | MAKAPKRAFV CNECGADYPR WQGQCSACHA WNTITEVRLA ASPTVARNER LSGYAGSAGV AKVQKLSDIS LEELPRFSTG FKEFDRVLGG GVVPGSAILI GGNPGAGKST LLLQTLCKLA QQMKTLYVTG EESLQQVAMR AHRLGLPTDN LNMLSETSIE QICLIAEEEQ PKLMVIDSIQ VMHMADVQSS PGSVAQVRET AAYLTRFAKT RGVAIVMVGH VTKDGSLAGP KVLEHCIDCS VLLDGDADSR FRTLRSHKNR FGAVNELGVF AMTEQGLREV SNPSAIFLSR GDEVTSGSSV MVVWEGTRPL LVEIQALVDH SMMANPRRVA VGLEQNRLAI LLAVLHRHGG LQMADQDVFV NVVGGVKVTE TSADLALLLA MVSSLRDRPL PQDLVVFGEV GLAGEIRPVP SGQERISEAA KHGFRRAIVP AANVPKKAPE GMQIFGVKKL SDALSVFDDL
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