Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5898 |
Symbol | deoB |
ID | 6969774 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5551069 |
End bp | 5552292 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643389513 |
Product | phosphopentomutase |
Protein accession | YP_002273904 |
Protein GI | 209399462 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1015] Phosphopentomutase |
TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTG CATTTATTAT GGTGCTGGAC TCATTCGGCA TCGGCGCTAC AGAAGATGCA GAACGCTTTG GTGACGTCGG GGCTGACACC CTGGGTCATA TCGCAGAAGC TTGTGCCAAA GGCGAAGCTG ATAACGGTCG TAAAGGCCCG CTCAATCTGC CAAATCTGAC CCGTCTGGGG CTGGCGAAAG CACACGAAGG TTCTACCGGT TTCATTCCGG CGGGAATGGA CGGCAACGCT GAAGTTATCG GCGCGTACGC ATGGGCGCAC GAAATGTCAT CCGGTAAAGA TACCCCGTCT GGTCACTGGG AAATTGCCGG TGTCCCGGTT CTGTTTGAGT GGGGATATTT CTCCGATCAC GAAAACAGCT TCCCGCAAGA GCTGCTGGAT AAACTGGTCG AACGCGCTAA TCTGCCGGGT TACCTCGGTA ACTGCCACTC TTCCGGTACG GTCATTCTGG ATCAACTGGG CGAAGAGCAC ATGAAAACCG GCAAGCCGAT TTTCTATACC TCCGCTGACT CCGTGTTCCA GATTGCCTGC CATGAAGAAA CTTTCGGTCT GGATAAACTC TACGAACTGT GCGAAATCGC CCGTGAAGAG CTGACCAACG GCGGCTACAA TATCGGTCGT GTTATCGCTC GTCCGTTTAT CGGCGACAAA GCCGGTAACT TCCAGCGTAC CGGTAACCGT CACGACCTGG CTGTTGAGCC GCCAGCACCG ACCGTGCTGC AGAAACTGGT TGATGAAAAA CACGGCCAGG TGGTTTCGGT CGGTAAAATT GCAGACATCT ACGCCAACTG CGGTATCACC AAAAAAGTGA AAGCGACTGG CCTGGACGCG CTGTTTGACG CCACCATCAA AGAGATGAAA GAAGCGGGTG ATAACACCAT CGTCTTCACC AACTTCGTTG ACTTCGACTC TTCCTGGGGC CACCGTCGCG ACGTCGCCGG TTATGCTGCG GGTCTGGAAC TGTTCGACCG CCGTCTGCCG GAGCTGATGT CTCTGCTGCG CGATGACGAC ATCCTGATCC TCACCGCTGA CCACGGCTGT GATCCGACCT GGACCGGTAC TGACCACACG CGTGAACACA TTCCGGTACT GGTTTACGGC CCGAAAGTAA AACCGGGCTC ACTGGGTCAC CGTGAAACCT TCGCGGATAT CGGCCAGACT CTGGCAAAAT ATTTTGGTAC TTCTGATATG GAATATGGCA AAGCCATGTT CTGA
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Protein sequence | MKRAFIMVLD SFGIGATEDA ERFGDVGADT LGHIAEACAK GEADNGRKGP LNLPNLTRLG LAKAHEGSTG FIPAGMDGNA EVIGAYAWAH EMSSGKDTPS GHWEIAGVPV LFEWGYFSDH ENSFPQELLD KLVERANLPG YLGNCHSSGT VILDQLGEEH MKTGKPIFYT SADSVFQIAC HEETFGLDKL YELCEIAREE LTNGGYNIGR VIARPFIGDK AGNFQRTGNR HDLAVEPPAP TVLQKLVDEK HGQVVSVGKI ADIYANCGIT KKVKATGLDA LFDATIKEMK EAGDNTIVFT NFVDFDSSWG HRRDVAGYAA GLELFDRRLP ELMSLLRDDD ILILTADHGC DPTWTGTDHT REHIPVLVYG PKVKPGSLGH RETFADIGQT LAKYFGTSDM EYGKAMF
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