Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5896 |
Symbol | deoC |
ID | 6967866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5548789 |
End bp | 5549568 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643389511 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_002273902 |
Protein GI | 209400237 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATC TGAAAGCAAG CAGCCTGCGT GCACTGAAAT TGATGGACCT GACCACCCTG AATGACGACG ACACCGACGA GAAAGTAATT GCTCTGTGTC ATCAGGCCAA AACTCCGGTC GGCAATACCG CCGCTATCTG TATCTATCCT CGCTTTATCC CGATTGCTCG CAAAACACTG AAAGAGCAGG GCACCCCGGA AATCCGTATT GCTACGGTAA CCAACTTCCC ACACGGTAAC GACGACATCG AAATCGCGCT GGCAGAAACC CGTGCGGCAA TCGCCTACGG TGCTGATGAA GTTGACGTTG TGTTCCCGTA CCGCGCGCTG ATGGCGGGTA ACGAGCAGGT TGGTTTTGAC CTGGTGAAAG CCTGTAAAGA GGCTTGCGCG GCAGCGAATG TACTGCTGAA AGTGATCATC GAAACCGGCG AACTGAAAGA CGAAGCGCTG ATCCGTAAAG CGTCTGAAAT CTCCATCAAA GCGGGTGCGG ACTTCATCAA AACCTCTACC GGTAAAGTGG CTGTGAACGC GACGCCGGAA AGCGCGCGCA TCATGATGGA AGTGATCCGT GATATGGGCG TAGAAAAAAC CGTTGGTTTC AAACCGGCGG GCGGCGTGCG TACTGCGGAA GATGCGCAGA AATATCTCGC CATCGCAGAT GAACTGTTCG GTGCTGACTG GGCTGATGCG CGTCACTACC GCTTTGGTGC TTCCAGCCTG CTGGCAAGCC TGCTGAAAGC GCTGGGTCAC GGCGACGGTA AGAGCGCCAG CAGCTACTAA
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Protein sequence | MTDLKASSLR ALKLMDLTTL NDDDTDEKVI ALCHQAKTPV GNTAAICIYP RFIPIARKTL KEQGTPEIRI ATVTNFPHGN DDIEIALAET RAAIAYGADE VDVVFPYRAL MAGNEQVGFD LVKACKEACA AANVLLKVII ETGELKDEAL IRKASEISIK AGADFIKTST GKVAVNATPE SARIMMEVIR DMGVEKTVGF KPAGGVRTAE DAQKYLAIAD ELFGADWADA RHYRFGASSL LASLLKALGH GDGKSASSY
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