Gene ECH74115_5896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5896 
SymboldeoC 
ID6967866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5548789 
End bp5549568 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content55% 
IMG OID643389511 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_002273902 
Protein GI209400237 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC TGAAAGCAAG CAGCCTGCGT GCACTGAAAT TGATGGACCT GACCACCCTG 
AATGACGACG ACACCGACGA GAAAGTAATT GCTCTGTGTC ATCAGGCCAA AACTCCGGTC
GGCAATACCG CCGCTATCTG TATCTATCCT CGCTTTATCC CGATTGCTCG CAAAACACTG
AAAGAGCAGG GCACCCCGGA AATCCGTATT GCTACGGTAA CCAACTTCCC ACACGGTAAC
GACGACATCG AAATCGCGCT GGCAGAAACC CGTGCGGCAA TCGCCTACGG TGCTGATGAA
GTTGACGTTG TGTTCCCGTA CCGCGCGCTG ATGGCGGGTA ACGAGCAGGT TGGTTTTGAC
CTGGTGAAAG CCTGTAAAGA GGCTTGCGCG GCAGCGAATG TACTGCTGAA AGTGATCATC
GAAACCGGCG AACTGAAAGA CGAAGCGCTG ATCCGTAAAG CGTCTGAAAT CTCCATCAAA
GCGGGTGCGG ACTTCATCAA AACCTCTACC GGTAAAGTGG CTGTGAACGC GACGCCGGAA
AGCGCGCGCA TCATGATGGA AGTGATCCGT GATATGGGCG TAGAAAAAAC CGTTGGTTTC
AAACCGGCGG GCGGCGTGCG TACTGCGGAA GATGCGCAGA AATATCTCGC CATCGCAGAT
GAACTGTTCG GTGCTGACTG GGCTGATGCG CGTCACTACC GCTTTGGTGC TTCCAGCCTG
CTGGCAAGCC TGCTGAAAGC GCTGGGTCAC GGCGACGGTA AGAGCGCCAG CAGCTACTAA
 
Protein sequence
MTDLKASSLR ALKLMDLTTL NDDDTDEKVI ALCHQAKTPV GNTAAICIYP RFIPIARKTL 
KEQGTPEIRI ATVTNFPHGN DDIEIALAET RAAIAYGADE VDVVFPYRAL MAGNEQVGFD
LVKACKEACA AANVLLKVII ETGELKDEAL IRKASEISIK AGADFIKTST GKVAVNATPE
SARIMMEVIR DMGVEKTVGF KPAGGVRTAE DAQKYLAIAD ELFGADWADA RHYRFGASSL
LASLLKALGH GDGKSASSY