Gene ECH74115_5891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5891 
Symbol 
ID6969804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5545151 
End bp5545933 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content55% 
IMG OID643389508 
Productputative deoxyribonuclease YjjV 
Protein accessionYP_002273899 
Protein GI209397271 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTTGCC GTTTTATCGA CACCCACTGC CATTTTGATT TCCCGCCTTT TATTGGCGAT 
GAAGAGGCCA GCCTGCAACG CGCGGCACAA GCGGGCGTAG GCAAGATCAT TGTTCCGGCA
ACCGAGGCGG AAAATTTTGC CCGCGTGCAG GCGTTAGCGG AAAATTATCA ACCGCTGTAT
GCCGCATTGG GCTTGCATCC TGGTATGTTG GAAAAACATA GCGATGTGTC TCTTGATCAG
CTACAGCAGG CGCTGGAAAG GCGTCCGGCG AAGGTGGTGG CGGTGGGGGA GAGCGGTCTG
GATCTCTTCG GCGACGATCC GCAATTTGAG AGGCAGCAGT GGTTTCTCGA CGAACAACTG
AAACTGGCGA AACGCTACGA TCTGCCGGTG ATCCTGCATT CACGGCGCAC ACACGACAAA
CTGGCGATGC ATCTTAAACG CCACGATTTA TCGCGCACTG GCGTGGTTCA CGGTTTTTCC
GGCAGCCTGC AACAGGCCGA GCGGTTTGTA CAGCTGGGCT ACAAAATCGG CGTAGGCGGT
ACTATCACCT ATCCACGCGC CAGTAAAACC CGCGTTGTCA TCGCAAAATT ACCGCTGGCA
TCGTTGTTGC TGGAAACCGA CGCGCCGGAT ATGCCGCTCA ACGGTTTTCA GGGGCAGCCT
AACCGCCCGG AACAGGCTGC GCGGGTGTTT GACGTGCTTT GCGAGTTGCG CCCGGAACCA
GAAGATGAGA TTGCCGAAGT GTTGCTTAAT AACACGTATG CGGTGTTTAA CGTTCGTGGG
TAG
 
Protein sequence
MICRFIDTHC HFDFPPFIGD EEASLQRAAQ AGVGKIIVPA TEAENFARVQ ALAENYQPLY 
AALGLHPGML EKHSDVSLDQ LQQALERRPA KVVAVGESGL DLFGDDPQFE RQQWFLDEQL
KLAKRYDLPV ILHSRRTHDK LAMHLKRHDL SRTGVVHGFS GSLQQAERFV QLGYKIGVGG
TITYPRASKT RVVIAKLPLA SLLLETDAPD MPLNGFQGQP NRPEQAARVF DVLCELRPEP
EDEIAEVLLN NTYAVFNVRG