| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5888 |
|---|
| Symbol | osmY |
|---|
| ID | 6970163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 5543066 |
|---|
| End bp | 5543671 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643389505 |
|---|
| Product | periplasmic protein |
|---|
| Protein accession | YP_002273896 |
|---|
| Protein GI | 209398467 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.223121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATGA CAAGACTGAA GATTTCGAAA ACTCTGCTGG CTGTAATGTT GACCTCTGCC
GTCGCGACCG GCTCTGCCTA CGCGGAAAAC AACGCGCAGA CTACCAATGA AAGCGCAGGG
CAAAAAGTCG ATAGCTCTAT GAATAAAGTC GGTAATTTCA TGGATGACAG CGCCATCACC
GCGAAAGTGA AGGCGGCGCT GGTGGATCAT GACAACATCA AGAGCACCGA TATCTCTGTC
AAAACCGATC AAAAAGTCGT GACCCTGAGC GGTTTCGTTG AAAGCCAGGC CCAGGCCGAA
GAGGCAGTGA AAGTGGCGAA AGGTGTTGAA GGGGTGACCT CTGTCAGCGA CAAACTGCAC
GTTCGCGACG CTAAAGAAGG CTCTGTGAAG GGCTACGCGG GTGACACCGC CACCACCAGT
GAAATCAAAG CCAAATTGCT GGCGGACGAT ATCGTCCCTT CCCGTCATGT GAAAGTTGAA
ACCACCGATG GCGTGGTTCA GCTCTCTGGT ATCGTAGATT CTCAGGCACA AAGTGACCGT
GCTGAAAGTA TCGCCAAAGC GGTAGATGGT GTGAAAAGCG TTAAAAATGA TCTGAAAACT
AAGTAA
|
|---|
| Protein sequence | MTMTRLKISK TLLAVMLTSA VATGSAYAEN NAQTTNESAG QKVDSSMNKV GNFMDDSAIT
AKVKAALVDH DNIKSTDISV KTDQKVVTLS GFVESQAQAE EAVKVAKGVE GVTSVSDKLH
VRDAKEGSVK GYAGDTATTS EIKAKLLADD IVPSRHVKVE TTDGVVQLSG IVDSQAQSDR
AESIAKAVDG VKSVKNDLKT K
|
|---|
| |