| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5887 |
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| Symbol | prfC |
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| ID | 6969765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5541084 |
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| End bp | 5542673 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643389504 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_002273895 |
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| Protein GI | 209399061 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.397514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTGT CTCCTTATTT GCAAGAGGTG GCGAAGCGCC GCACTTTTGC CATTATTTCT
CACCCGGACG CCGGTAAGAC TACCATCACC GAGAAGGTGC TGCTGTTCGG ACAGGCCATT
CAGACCGCCG GTACAGTAAA AGGCCGTGGT TCCAACCAGC ACGCTAAGTC GGACTGGATG
GAGATGGAAA AGCAGCGTGG GATCTCCATT ACTACGTCTG TGATGCAGTT TCCGTATCAC
GATTGCCTGG TTAACCTGCT CGACACCCCG GGGCACGAAG ACTTCTCGGA AGATACCTAT
CGTACCCTGA CGGCGGTGGA CTGCTGCCTG ATGGTTATCG ACGCCGCAAA AGGTGTTGAA
GATCGTACCC GTAAGCTGAT GGAAGTTACC CGTCTGCGCG ACACGCCGAT CCTCACCTTT
ATGAACAAAC TTGACCGTGA TATCCGCGAC CCGATGGAAT TGCTCGATGA AGTTGAGAAC
GAGCTGAAAA TTGGCTGCGC ACCGATCACC TGGCCAATTG GCTGCGGCAA GCTGTTTAAA
GGCGTTTACC ACCTTTATAA AGATGAAACC TATCTCTATC AGAGCGGTAA AGGGCACACC
ATTCAGGAAG TCCGCATTGT TAAAGGGCTG AATAACCCGG ATCTCGATGC TGCGGTTGGT
GAAGATCTGG CACAGCAGCT GCGTGACGAA CTGGAACTGG TGAAAGGCGC GTCTAACGAG
TTCGACAAAG AGCTGTTCCT TGCGGGCGAA ATCACTCCGG TATTCTTCGG TACTGCGCTG
GGTAACTTCG GCGTTGATCA TATGCTGGAT GGCCTGGTGG AGTGGGCGCC TGCGCCGATG
CCGCGTCAGA CCGATACCCG TACCGTAGAA GCGAGCGAAG ATAAATTTAC CGGCTTCGTA
TTTAAAATTC AGGCCAACAT GGACCCGAAA CACCGCGACC GCGTGGCGTT TATGCGTGTG
GTGTCCGGTA AATATGAAAA AGGCATGAAG CTGCGCCAGG TGCGCACTGC GAAAGATGTG
GTGATCTCCG ACGCGCTGAC CTTTATGGCG GGTGACCGTT CGCACGTTGA AGAAGCGTAT
CCGGGCGATA TCCTCGGCCT GCACAACCAC GGCACCATTC AGATCGGCGA CACCTTTACC
CAGGGTGAGA TGATGAAGTT CACCGGTATT CCGAACTTCG CACCAGAACT GTTCCGTCGT
ATCCGCCTGA AAGATCCGCT GAAGCAAAAA CAGCTGCTCA AAGGGCTGGT ACAGCTTTCC
GAAGAGGGCG CGGTGCAGGT GTTCCGTCCA ATCTCCAACA ACGATCTGAT CGTTGGTGCG
GTTGGTGTGC TGCAGTTTGA TGTGGTGGTA GCGCGCCTGA AGAGCGAATA CAACGTTGAA
GCAGTGTATG AGTCAGTCAA CGTTGCCACT GCCCGCTGGG TAGAATGTGC AGACGCGAAG
AAATTCGAAG AGTTCAAGCG TAAGAACGAA AGCCAACTGG CGCTTGATGG CGGCGATAAC
CTCGCTTACA TCGCTACCAG CATGGTCAAC CTGCGCCTGG CACAGGAACG TTATCCGGAC
GTTCAGTTCC ACCAGACCCG CGAGCATTAA
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| Protein sequence | MTLSPYLQEV AKRRTFAIIS HPDAGKTTIT EKVLLFGQAI QTAGTVKGRG SNQHAKSDWM
EMEKQRGISI TTSVMQFPYH DCLVNLLDTP GHEDFSEDTY RTLTAVDCCL MVIDAAKGVE
DRTRKLMEVT RLRDTPILTF MNKLDRDIRD PMELLDEVEN ELKIGCAPIT WPIGCGKLFK
GVYHLYKDET YLYQSGKGHT IQEVRIVKGL NNPDLDAAVG EDLAQQLRDE LELVKGASNE
FDKELFLAGE ITPVFFGTAL GNFGVDHMLD GLVEWAPAPM PRQTDTRTVE ASEDKFTGFV
FKIQANMDPK HRDRVAFMRV VSGKYEKGMK LRQVRTAKDV VISDALTFMA GDRSHVEEAY
PGDILGLHNH GTIQIGDTFT QGEMMKFTGI PNFAPELFRR IRLKDPLKQK QLLKGLVQLS
EEGAVQVFRP ISNNDLIVGA VGVLQFDVVV ARLKSEYNVE AVYESVNVAT ARWVECADAK
KFEEFKRKNE SQLALDGGDN LAYIATSMVN LRLAQERYPD VQFHQTREH
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