Gene ECH74115_5870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5870 
Symbol 
ID6967042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5526920 
End bp5527834 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content47% 
IMG OID643389487 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002273879 
Protein GI209398199 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTT CACAAAATTT ACGCCACAAT GTGATTAACC AGGTCATTGA TGATATGGCG 
CGGGGTCATA TCCCTTCCCC ACTTCCATCG CAAAGTGCGC TGGCGGAAAT GTACAACATC
AGCCGCACTA CAGTGCGTCA TATTCTCAGC CACTTACGCG AATGCGGCGT CTTAACGCAG
GTTGGAAACG ACTATGTTAT TGCGCGTAAA CCTGACCATG ATGACGGTTT CGCCTGTACT
ACCGCTTCAA TGAGTGAACA AAACAAAGTG TTTGAGCAGG CTTTTTTCAC GATGATAAAC
CAGCGCCAGT TACGCCCAGG GGAAACTTTT TCTGAACTGC AACTGGCTCG GGCCGCGGGT
GTCAGCCCGG TGGTTGTAAG AGAATATCTT TTAAAATTCG GCCGTTATAA TCTTATTCAA
AGCGAAAAGC GCGGCCAGTG GAGCATGAAG CAATTCGATC AATCCTACGC TGAGCAGCTG
TTTGAGCTAC GCGAAATGCT CGAAACACAT TCACTTCAGC ACTTTCTCAA CCTGCCTGAT
CATGATCCCC GCTGGCTGCA GGCGAAAACC ATGCTCGAAC GTCATCGGCT ACTGCGTGAC
AACATCGGCA ATAGCTTTCG CATGTTCTCG CAACTTGACA GAGATTTTCA CTCCTTACTG
CTTTCAGCTG CCGACAATAT CTTTTTTGAT CAATCGCTTG AGATCATCTC AGTCATCTTT
CATTTTCACT ATCAATGGGA CGAAAGCGAT CTTAAACAGC GCAATATCAT TGCCGTCGAT
GAGCATATGA CCATTCTCAG CGCTCTGATT TGCCGCAGTG ACCTTGATGC CACCCTTGCG
CTCCGTAACC ATTTGAATTC AGCGAAACAA TCAATGATTC GATCCATTAA TGAGAACACG
CGTTATGCTC ATTAA
 
Protein sequence
MSRSQNLRHN VINQVIDDMA RGHIPSPLPS QSALAEMYNI SRTTVRHILS HLRECGVLTQ 
VGNDYVIARK PDHDDGFACT TASMSEQNKV FEQAFFTMIN QRQLRPGETF SELQLARAAG
VSPVVVREYL LKFGRYNLIQ SEKRGQWSMK QFDQSYAEQL FELREMLETH SLQHFLNLPD
HDPRWLQAKT MLERHRLLRD NIGNSFRMFS QLDRDFHSLL LSAADNIFFD QSLEIISVIF
HFHYQWDESD LKQRNIIAVD EHMTILSALI CRSDLDATLA LRNHLNSAKQ SMIRSINENT
RYAH