| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5860 |
|---|
| Symbol | |
|---|
| ID | 6967376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 5513231 |
|---|
| End bp | 5514712 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643389479 |
|---|
| Product | type I restriction-modification system, M subunit |
|---|
| Protein accession | YP_002273871 |
|---|
| Protein GI | 209398363 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.822857 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACA ACATGTCTAT CAGCTCAGTA ATCAAATCAT TACAAGATAT TATGCGCAAA
GATGCCGGTG TGGATGGCGA TGCGCAGCGT CTCGGTCAGC TCTCCTGGCT GCTGTTTTTG
AAAATCTTCG ATGCCCAGGA AGAGGCGCTG GAACTGGAGC AGGATAACTA TCAATATCCG
ATCCCACAGC GTTATTTATG GCGCAGTTGG GCCGCCAACG CGCAGGGCAT TACCGGTGAT
TCCCTGCTGG AATTCGTTAA TGATGATCTG TTCCCGGCGT TGAAAAACCT CACTGCGCCT
ATCGATAAAA ACCCACGCGG CTACGTGGTG AAGCAGGCGT TCAGCGATGC CTATAACTAT
ATGAAAAACG GTACGCTACT GCGTCAGGTG ATCAATAAGC TGAACGAAAT TGACTTTACC
AGCGCCAGCG AACGCCATCT GTTTGGTGAT ATTTACGAAC AGATCCTTAA AGATCTGCAA
TCTGCGGGCA ATGCGGGCGA ATTCTATACT CCACGCGCCG TCACTCGCTT TATGGTGGAT
CGCGTTGATC CGAAACTCGG CGAATCCATT ATGGACCCGG CCTGCGGTAC GGGCGGTTTT
CTTGCCTGCG CATTTGATCA TGTAAAGAAC AAATACGTGA AGAGCGTCGC CGATCATCAG
ACGCTGCAAC AACAGATCCA CGGTGTTGAG AAAAAACAGC TTCCGCACCT GCTGGCGACC
ACCAATATGC TGCTACACGG CATTGAAGTG CCAGTGCAAA TTCGTCACGA CAACACTCTG
AACAAACCGC TTTCCTCCCG GGATGAGCAA CTGGATGTCA TTGTTACCAA CCCGCCGTTT
GGTGGCACGG AAGAAGACGG TATTGAGAAG AACTTTCCGG CAGAGATGCA AACCCGCGAA
ACGGCGGATT TGTTCCTGCA ACTGATTGTG GAAGTACTGG CGAAAAATGG TCGCGCGGCG
GTGGTATTGC CGGATGGCAC ACTATTTGGC GAAGGCGTTA AAACCAAAAT CAAAAAGCTA
CTTACCGAAG AGTGCAACCT GCATACCATC GTGCGCTTAC CGAATGGTGT GTTTAACCCC
TATACCGGCA TTAAAACCAA CCTGTTGTTC TTTACCAAAG GTCAGCCAAC CAAAGAGATT
TGGTTCTATG AGCATCCGTA TCCGGCGGGC GTAAAAAACT ACAGCAAAAC TAAGCCGATG
AAGTTTGAAG AGTTTCAGGC GGAGATCGAC TGGTGGGGTA ACGAGGCCGA TGGTTTTGCC
AGCCGCGTAG AGAATGAGCA GGCGTGGAAA GTCAGCATTG ATGACGTGAT TGCGCGTAAC
TTCAATCTGG ATATTAAAAA CCCACATCAG GCGGAAACCG TCAGCCATGA TCCGGCCGAG
CTGTTAGCGC AGTATGCAAA ACAGCAGGCG GAGATCCAGA CGCTGCGTAA TCAACTGCGC
GATATTCTTG GCGCTGCGCT GTCTGGCAAG GAGGTTAACT AA
|
|---|
| Protein sequence | MEYNMSISSV IKSLQDIMRK DAGVDGDAQR LGQLSWLLFL KIFDAQEEAL ELEQDNYQYP
IPQRYLWRSW AANAQGITGD SLLEFVNDDL FPALKNLTAP IDKNPRGYVV KQAFSDAYNY
MKNGTLLRQV INKLNEIDFT SASERHLFGD IYEQILKDLQ SAGNAGEFYT PRAVTRFMVD
RVDPKLGESI MDPACGTGGF LACAFDHVKN KYVKSVADHQ TLQQQIHGVE KKQLPHLLAT
TNMLLHGIEV PVQIRHDNTL NKPLSSRDEQ LDVIVTNPPF GGTEEDGIEK NFPAEMQTRE
TADLFLQLIV EVLAKNGRAA VVLPDGTLFG EGVKTKIKKL LTEECNLHTI VRLPNGVFNP
YTGIKTNLLF FTKGQPTKEI WFYEHPYPAG VKNYSKTKPM KFEEFQAEID WWGNEADGFA
SRVENEQAWK VSIDDVIARN FNLDIKNPHQ AETVSHDPAE LLAQYAKQQA EIQTLRNQLR
DILGAALSGK EVN
|
|---|
| |