| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5848 |
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| Symbol | hgdC |
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| ID | 6971534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 5500671 |
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| End bp | 5501438 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643389470 |
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| Product | (R)-2-hydroxyglutaryl-CoA dehydratase activator |
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| Protein accession | YP_002273862 |
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| Protein GI | 209398356 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) |
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| TIGRFAM ID | [TIGR00241] CoA-substrate-specific enzyme activase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACATATT CGATTGGCAT TGATTCTGGT TCTACCGCCA CCAAAGGGAT CTTACTCGCA
GACGGCGTGA TTACGCGCCG TTTCCTCGTT CCAACACCCT TTCGACCGGC AACAGCAATT
ACTGAAGCCT GGGAAACTCT GCGCGAAGGG TTAGAGACAA CGCCGTTTCT GACGCTCACC
GGCTACGGGC GGCAACTGGT GGATTTTGCC GATAAACAAG TGACGGAAAT CTCCTGTCAC
GGGCTGGGCG CACGGTTTCT TGCGCCAGCA ACGCGCGCGG TAATCGACAT CGGTGGTCAG
GACAGCAAAG TGATTCAGCT TGATGATGAC GGTAACCTGT GCGATTTCCT GATGAATGAC
AAATGCGCGG CGGGCACCGG GCGTTTCCTG GAGGTGATCT CGCGCACGCT TGGCACCAGC
GTCGAGCAAC TCGACTGCAT TACCGAAAAT GTCACGCCGC ACGCCATCAC GAGTATGTGC
ACAGTGTTTG CTGAATCAGA AGTGATCAGC CTGCGCTCAG CGGGCGTCGC GCCAGAAGCG
ATTCTCGCCG GAGTGATTAA CGCGATGGCG CGGCGGAGTG CCAATTTCAT TGCTCGTCTC
TCCTGTGAAG CGCCGATTCT GTTTACTGGT GGCGTTAGTC ATTGCCAGAC GTTTGCCCGG
ATGCTGGAAT CTCACCTGCG AATGCCGGTA AATACCCATC CTGATGCGCA ATTTGCTGGC
ACAATTGGCG CGGCGGTAAT TGGTCAACGA GTGAGGACAC GCCGATGA
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| Protein sequence | MTYSIGIDSG STATKGILLA DGVITRRFLV PTPFRPATAI TEAWETLREG LETTPFLTLT
GYGRQLVDFA DKQVTEISCH GLGARFLAPA TRAVIDIGGQ DSKVIQLDDD GNLCDFLMND
KCAAGTGRFL EVISRTLGTS VEQLDCITEN VTPHAITSMC TVFAESEVIS LRSAGVAPEA
ILAGVINAMA RRSANFIARL SCEAPILFTG GVSHCQTFAR MLESHLRMPV NTHPDAQFAG
TIGAAVIGQR VRTRR
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