| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5824 |
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| Symbol | fimF |
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| ID | 6968638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5476281 |
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| End bp | 5476811 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643389451 |
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| Product | fimbrial protein FimF |
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| Protein accession | YP_002273843 |
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| Protein GI | 209400351 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAACA AACCTTTTTA TCTTCTGTGC GCTTTTTTGT GGCTGGCAGT GAGTCACGCT
TTGGCTGCGG ATAGCACGAT TACTATCCGC GGCTATGTCA GAGATAACGG CTGTAGTGTG
GCCGCTGAAT CAACCAATTT TACTGTTGAT CTGATGGAAA ACGCGGCGAA GCAATTTAAC
AACATTGGCG CGACGACTCC TGTCGTTCCA TTTCGTATTT TGCTGTCACC CTGTGGTAAC
GCCGTTTCTG CCGTAAAAGT TGGGTTTACC GGCGTTGCAG ATAGCCACAA TGCCAACCTG
CTTGCACTTG AAAATACGGT GTCAGCGGCT TCGGGACTGG GAATACAGCT TCTGAATGAG
CAGCAAAATC AGATACCCCT TAATGCTCCA TCGTCCGCGA TTTCGTGGAC GACCCTGACG
CCGGGTAAAC CAAATACGTT GAATTTTTAC GCCCGGCTAA TGGCGACACA GGTGCCTGTC
ACTGCGGGGC ATATCAATGC CACGGCTACC TTCACTCTTG AATATCAGTA A
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| Protein sequence | MRNKPFYLLC AFLWLAVSHA LAADSTITIR GYVRDNGCSV AAESTNFTVD LMENAAKQFN
NIGATTPVVP FRILLSPCGN AVSAVKVGFT GVADSHNANL LALENTVSAA SGLGIQLLNE
QQNQIPLNAP SSAISWTTLT PGKPNTLNFY ARLMATQVPV TAGHINATAT FTLEYQ
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