| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5822 |
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| Symbol | fimC |
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| ID | 6967707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5472843 |
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| End bp | 5473568 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643389449 |
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| Product | chaperone protein FimC |
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| Protein accession | YP_002273841 |
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| Protein GI | 209399598 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAATA AAAACGTCAA TGTAAGGAAA TCGCAGGAAA TAACATTCTG CTTGCTGGCA
GGTATCCTGA TGTTCATGGC AATGATGGTT GCCGGACGCG CTGAAGCGGG AGTGGCCTTA
GGTGCGACTC GCATAATTTA TCCGGCAGGG CAAAAACAAG TGCAACTTGC CGTGACAAAT
AATGATGAAA ATAGTACCTA TTTAATTCAA TCATGGGTGG AAAATGCCGA TGGTGTAAAG
GATGGTCGTT TTATCGTGAC GCCTCCTCTG TTTGCGATGA AGGGAAAAAA AGAGAATACC
TTACGTATTC TTGATGCAAC AAATAACCAA TTGCCACAGG ACCGGGAAAG TTTATTCTGG
ATGAACGTTA AAGCGATTCC GTCAATGGAT AAATCAAAAT TGACTGAGAA TACGCTACAG
CTCGCAATTA TCAGCCGCAT TAAACTGTAC TATCGTCCGG CTAAATTAGC GTTGCCACCC
GATCAGGCCG CAGAAAAATT AAGATTTCGT CGTAGCGCGA ATTCTCTGAC GCTGATTAAC
CCGACACCCT ATTACCTGAC GGTAACAGAG TTGAATGCCG GAGCCCGGGT TCTTGAAAAT
GCCTTGGTGC CTCCAATGGG CGAAAGCACG GTTAAATTGC CTTCTGATGC GGGAAGCAAT
ATTACTTACC GAACAATAAA TGATTATGGT GCACTTACCC CCAAAATGAC GGGCGTAATG
GAATAA
|
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| Protein sequence | MSNKNVNVRK SQEITFCLLA GILMFMAMMV AGRAEAGVAL GATRIIYPAG QKQVQLAVTN
NDENSTYLIQ SWVENADGVK DGRFIVTPPL FAMKGKKENT LRILDATNNQ LPQDRESLFW
MNVKAIPSMD KSKLTENTLQ LAIISRIKLY YRPAKLALPP DQAAEKLRFR RSANSLTLIN
PTPYYLTVTE LNAGARVLEN ALVPPMGEST VKLPSDAGSN ITYRTINDYG ALTPKMTGVM
E
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