| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5819 |
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| Symbol | fimE |
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| ID | 6971688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5470593 |
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| End bp | 5471189 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643389446 |
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| Product | tyrosine recombinase |
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| Protein accession | YP_002273838 |
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| Protein GI | 209398596 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.97237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTAAAC GTCGTTATCT TACCGGTAAA GAAGTTCAGG CCATGATGCA GGCGGTTTGT
TACGGGGCAA CGGGAGCCAG AGATTATTGT CTTATTCTGT TGGCATATCG GCATGGGATG
CGTATTAGTG AACTGCTTGA TCTGCATTAT CAGGATCTTG ACCTTAATGA AGGCCGAATA
AATATTCGCC GACTGAAGAA CGGATTTTCT ACCGTTCACC CGTTACGTTT TGATGAGCGT
GAAGCTGTGG AACGCTGGAC CCTAGAACGT GCTAACTGGA AAGGCGCTGA CCGGACCGAC
GCCATATTTA TTTCTCGCCG CGGGAGTCGG CTTTCTCGCC AGCAGGCCTA TCGCATTATT
CGTGATGCCG GTATTGAAGC TGGAACCGTA ACGCAGACTC ATCCTCATAT GTTAAGGCAT
GCTTGCGGTT ATGAACTGGC GGAGCGTGGT GCAGATACTC GTTTAATTCA GGATTATCTC
GGGCATCGAA ATATTCGCCA TACTGTACGT TATACCGCCA GTAATGCTGC TCGTTTTGCC
GGATTATGGG AAAGAAATAA TCTCATAAAC GAAAAATTAA AAAGAGAAGA AGTTTGA
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| Protein sequence | MSKRRYLTGK EVQAMMQAVC YGATGARDYC LILLAYRHGM RISELLDLHY QDLDLNEGRI
NIRRLKNGFS TVHPLRFDER EAVERWTLER ANWKGADRTD AIFISRRGSR LSRQQAYRII
RDAGIEAGTV TQTHPHMLRH ACGYELAERG ADTRLIQDYL GHRNIRHTVR YTASNAARFA
GLWERNNLIN EKLKREEV
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