| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5810 |
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| Symbol | |
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| ID | 6971382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5455224 |
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| End bp | 5461565 |
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| Gene Length | 6342 bp |
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| Protein Length | 2113 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643389438 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002273830 |
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| Protein GI | 209399692 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCGT CCGTTGTCAG TCGGCAGGTC GCCGACAGCG TTGCCGCCTT TTTACGGGCG
GCGTTCCCGC TAAACAGCCC GCTGTTTAAC GGTGAGAATA ACGATAATGT CTCAATGCTG
GAGCAATTTC TGGCCCAGCC GGAAACGCTG CTGAAAGGAC CATACCTTTC CGCCCAGTTG
CCGTTTCGTA AAAGTGACTT ACCGCTGAAT TTTTTCCCTA ATCTGACGCT GCCGTTCCCG
CCGCACGCGC ATCAGGCCCG GGCATTTCAG CGTCTGGGAA GCGACGCGCC ACAGCCGACG
CTGGTCGCAA CCGGTACCGG CTCCGGTAAA ACAGAATGTT TTATGTTCCC GCTGCTCAAC
CACTGCGCGG GCGCGTCACA AGCCGGGGTT AAAGCGATTA TCATCTACCC GATGAACGCC
CTGGCAACCG ATCAGGCCAG CCGTTTCGCC AAAACCATCG CCAGCGATCC ACAACTGCAT
GGCAAGGTGA CCGTCGGCCT GTTTGTCGGC GACAGCGAAA TCGAACCCAG CAAAAAAATG
TCGGCAGAAA AGGTCATTAC CTGTAAGCAC ACGCTGCGCG AAAGCCCGCC GGACATCCTG
TTGACCAACT ACAAAATGCT CGACTACCTG CTGATGCGCC CTGGCGATCA GCCGCTCTGG
CGTTACAACC AGCCCGGTTC ATTGCGTTAC CTGGTCGTGG ATGAATTGCA TACGTTTGAT
GGCGCGCAAG GGTCGGATCT GGCCTGTCTG GTGCGACGTT TGAAGCATCA CATAGGTGTG
GATAACCAAC GATTCGCCTG CGTCGGGACA TCAGCTACCG TCGGCGACGA ACTGGGGCAA
CTGCTCGATT ACGCAAAAAC AATCTTTGAC CAGCCGTTTA CCGATGACGC CGTTATTCGC
GAAGATCGCT ACACGGCAGC GGAGTACTTG CAGAATTACG CCATTGCGTA CAGTCAGTAT
CCGGGGCCGG AGGTCGCTTC GGCCCTGGAC CCGCAGAGTT ACGCTACCCC GGTAGCGTAT
CTTAACGGGC AAATCCCTTT GTGGTTCCCC GACAGCGACT TGCAACTCCC GGACGATCTG
GAGAGCGACG ACGGGCGTGA AAAGCGTATT GCGCTGGGGT CACTGTTACG CCGCCACAGC
GTGATGCATG TCTTACTCCA TGATCTGCAA GGCGGGATCC TCTCTGAACG AGAGTGTCTG
GAAAATCTCC AGGTCATGCT GGCAGAAAGC GCCGACCATG CCCGACGCGT GCTGCAAAGC
ATTCTGGCAC TGATCGCGCA GGCACGTCTC GAAGTACCGG AAACGGAACA CGATCGGCAA
AAACGTCTCC AGGCGAAGAA AGCGCGTCCG GTGCTGCCGT TTGTGCAACT GCGCTCCCAG
TTGTGGCTTC GTGAGATGCG TCGTCTGGTC GCCAGCGTGG CGAAAACGCC CCGACTGGTG
TTTGCCGATG ATGTGGCGGT GGAAGATCGC GAACACTATT TGCCGGTTAT CCACTGCCGT
GACTGCCACG CAACTGGCTG GGCCAGCCTG CGTCATGGGC AAAGCGTTCA GTTGGAAACA
GACCTCGACG GCATTTATCG CCAGTTCTTT GAAAAAGGGC GCTCCATCGT CCTTGCTTTC
CCGGATAACA ACGAAAAAGC GGTCAGTGGC GCACACCAGA AACTGTGTCC TACCTGTCTG
AAACTGAACC GACAGTCCAG CGTCCAGTGT GGACATTGCG GTCATACGGA ACTGTTGCAG
GTACTGATCC CGGATATGCT CAAAGAGCGT AAGGACGAGC TGGAGTTTGC TAATGAATGC
CCGTACTGCA ACAGCAAACA GGGGATTTCG ATTCTGGGGT CACGGGCTGC CAGTCTGTCG
GCGGTGATGA TTCACCAGCT TTATGGCAGC CAGTTCAACG AACATAAAAA GCTGATTACG
TTTTCTGACT CGGTACAAGA CGCCGCGCAT CGTGCCAGCT TCTTTACTGC CCGTACCTGG
CCGCTGATGA TTCGTGGGCA AATCGCCAGT GTTCTTAGCG AAAAAGAGAC ATTACCGCTG
GATGCGTTCG CGGCGCGTGT TTGCCAACAA ACGCGTGAAC GTTCACCGGA CGATGCTCAT
TTTGCAGCAA ACGTCATCGC ACCAAATATG CAGTGGCTGA ATGATTATCA GACGCTGAAA
AATGAAGGCA AACTGGCGGA GAACTCCGAT CTGCCGGAGC TGGTTTCCCT GCGCCTCGAC
TGGGAGGTGT ACAGCGAATT TACCCTGCGC GCGCGTATCG GACGTACGCT GGAAGCCACC
GGTTATGCCG TTGCCGGAGT GGATAAAGAT CGCTTCAATC CGGCAATTAC CGCCCTGCAT
CAACAGCTTT GTGAAGAGCT GGGTGATGAG ATGTCTGGTG TGAGCGTCGA GCAGGTAGCG
CACCTGGCGC TGGGGGTTAT CTGGTATCAA CGCCAGGCCG GGGCCGTTAT GCATCCGGCG
TTCGAAAGTT ATCGCCGTGA TGGCACGACC TTTATGATGA CGCAAAAAGA GCGTACCTCG
CGCTATATGC CTTCTATCGG TCCGAAAACG CGTAAACCGG CTTATGCGTC GTTTGAAAAA
ATTAATGGTT TCCATCGCCT GATTGGCGCG AAGTCTAACC CCAGTTGGTA TCAGCATTGG
ATCAATCGCA CGCTGAGTAA CGGCAATAAT CTGTTTATCA GTAGCGTTGC GGAAACAGTG
TTACGACGCC TGTTTACGGC GTTGAAAATA GCCGGAGTAG TAAAAGATTT TGACACCAAA
GGGCGTGAAG CCTGGGGACT GGTGCCTTCG GCGCTGGTGG TGAGCCGTGA CGTCGTTCAG
CTTAATTGCT CATGTTGCCG TGAGGTTGTC CGGGCTCCGG CCGATCAAGG CTGGCAGTGG
CGTAATGCGC CTTGTCTCTC TTTACGTTGT GAAGGTCGTT ACCAGGAAGT CGACAATACG
GCGACCTGGC GTTGGGAGAA CATGGACATC GCGCGCGTAC AGGGCGCAGA ACACACGGGG
CTGCTTAGCC GTGAAGATCG CGAAGTCACC GAAAAATCGT TCTACCGCGG CAACCAACCG
TGGAATATCA ACCTGTTGTC GGCAACACCG ACGCTGGAGA TGGGTATTGA CGTTGGGGAT
CTTTCCACCG TTTTACTCTG TTCTGTCCCA CCTGCTCAGG CCAACTACTT GCAGCGTATT
GGTCGCGCCG GTCGTAAAGA TGGTAACGCG TTAAACATTA CCGTGGCAGA AGGGAACCCG
CACGATCAGT TTTTCTTTGA AGAACCACTG GAGATGATGC AGGGCCAGGT GCAGGCTCCT
GGCGTCTTCC TTAATGCAAC GGCTATTCTC GAACGCCAGC TGGCAGCTTT TTGTATGGAT
AACTGGGTGA AAACCGGTGT ACCAGAATCC GCTATCTGTA AAAACGTCAA ACAGATGCTG
GATGAGCTGG AGTTCGGGCG TAAATCGGGT TTTCCGTATA ACTTACTGCG ATATATCGAA
CAGCATCATG CGGAGATTGC TGCGCAATTT ACGGCAATCT TCCCCGATCT TGCCGCAGAA
ACTCGCCAAC AGCTGTTGTC TTATCTTCAG GGCGCGCCAG GACAACGCTC GCTGGTGCAG
CGTATCGAAG AAGCGTTAAA ACTGCTGGTG GAAGATCGCA AATCTTTGCG CTCACGCATC
GATAAACTCA AGCGCAGTAT CGATAAACTG GAGAACGCGC CGCGCGATCA AAACTTTGAT
AGCGATATGC GCGAGTTAAC TTCGGAACGG CAGGCGCTGA TGGCGCTGGT CAATCAAATC
AACAATAAGC AAACGCTGAA TTTCCTCACG GATGAAGGTC TGCTGCCTAA CTACGCCTTC
CCGGAAGCCG GTATTACGTT ACGTTCTGTG CTCTGGCGGC GTAAAGAAGG CGGGGAAGCA
CGTGAATATC AAAACACCAC TTTCGAATAT GAACGCCCGG CATCAACGGC GCTGGCTGAG
CTGGCTCCGC TGAATAATTT CTATGCCGGT GGGCATAAAG TTGAAATTGA GCAGATAGAC
CTGAAGGTCT CTGAGCCGGA GAACTGGCGT ATCTGTAGCC ACTGTAACTA CAGCGAAAAT
ATCGACCAGA CGGGCGACCA GCATAAATAT TGCCCGAAAT GTGGCACACC GGGGTGGGCC
GATGCCGGAC AAAAAACCAC GCTGCTGAAA CTTCGCCAGG TTTATGCCCG CGCCAGCGCA
CGTGATAGCC AGATCAGCGA CGAGAGCGAC AGCCGTGAAC CTGCTTTCTT CCAGCGTCAG
CTATTGGTTA GTTTCGAAAA AGAAGATGTA TCGGCGGCAT ACGCGATTGA GGAAGGCGAA
GTTCCGTTTG GTTTTGAATT TTTAAGCAAA GTCACCCTGC GGGATATCAA CTTCGGCAAA
ATGGCGGATG ATGCCAATGA GTTGATGATT GCCGGAGAAG CGAAGAAGCG AACCGGGTTT
AAAGTTTGCC TCGGGTGCGG CATGGTGCAG CGTCCTCGCG ATCATGAACC ACGTCATGAT
TTGAGCTGCA AATATCGCAC GGAACCGGAA AAGGCGAAGT TCGAAGATTA TCTCTACCTC
TATCGCCAGC TGGAGTCAGA AGCGTTGCGT ATTCTGCTCC CGGTAAGCAG TTACAGTAAT
GACCGTGTCG TGGAGGCTTC TCTTGGGGCG GCGATCCAGC TCGGTCTTAA ACATTACTTC
AAGGGGAATG TCGATCACCT GAAAGGCGTT GTGTACCGCG AGCCGGAAAA TGAAGGCGAA
TCCTGGCGGC AGTATCTGGT GATTTACGAT ACCGTCCCGG GGGGGACTGG TTCTCTTAAA
GAACTGATGC GCACTCCCGA CAATTTGCTG AAATTACTTG AACTGGCCTA TCAGGCAATA
GTGGAATGCA GTTGCAACAA TGATACGCAT AAAGATGGTT GTTATCGTTG CGTTTACGCT
TACCGTGACC GTGGGCGCAT GAAGTATGTC TCCCGCGATC AGGCGCGTCT CTTGCTGGCG
AAAATTTTGC AGGCAAGAGA TTCGATACGG GTAATTGATT CCATCAAAAA CATTTCCCTC
GAAGCCATGA TGGGCAGTGA GCTGGAAAAA CGGTTTATTA GCTGCCTGCA AGAAAATAAA
AACCTGATTG TCAGTCGCAG TTACGCGCAT CAGGGCGCTG GGTGGATTAT TAACACCCGC
AGCGAACCGA TGATGAGCTG GCATCTTAAA GCTCAGGTGG ATTTAGGCGC TAAAGAGGCG
GTGGGGATCC CTTGTCGCCC GGATTACGTG CTATATCCGC TTATGCAGTC TGATGCCATT
AAACCGGTGG CTATTTTCCT TGATGGCTTT GCGTTCCACA AAAATAGCGT CGCAGAGGAT
GTGCAAAAAC GCCAGGCGAT TCGGGATAGC GGTAATTTCT GGGTGTGGAC AGTCACGTGG
GCCGATCTCA AAGAGCCAGG GCTTAAACAT GTTCAGGATG TCCTGGGACT TGGGCATAAC
CCGGATATGA AACAGCCTAA GTTTTATAAC CTGTTTCATG ATACCAACTT TGCGGCCCTT
GAAGCGTCGT TCCGGGAACG CAACAGTTTT GCACTGCTGC TGGATTATCT CGCCGATCCG
GGCGGAAGAA CGCAGTTATG GCAGAGAATG GCTGCTGCAC ATGCCTGGGT GTGGTTGGAT
GTGAAGAAGT CACAGGACGC GGGAACGAAA CAAAAGTATG CCTATGAAAT GCAGGAAAAC
GCGCCAGCTT GGCGGCTAGC AGAGCTTTTG CCAGACGAAC CGTTTGTCTT TGGTGGTTTA
CTCGATAGCT GTAACTCATC GCAGCAATTT ATTGAGCTGG CTTCGGTGTT ACCACAACAA
GCCATTAAAC CGACGACCAG CGTCGCACAA ATGCGCAGCT GGCTGCGTTT GCATATCTGT
TTTGACGATC GCTATACGCA GGATGACGGT TATGAAGCGG GACTCAATGG CTTCTGGCGA
CTGGTAAACC TGTTACAGTT CCTGCCGGAT ATGACCTTTA CCAGCCGTAA AGCCGTGCAT
TTACCGCAGG AAAGCGTTGA CACTAAAGTT TCGGCAACGC CAGAGGCAGT ACCAGAGACT
GATGAGAGTT GGGCTGAGAT TATTGAGTTT GGCTTATTAA GCGCTGAAGA GATCGCGTTG
CTTCAGTCTC ATTCTCTCTC TGCGCCGACT CTCGGCTACG AATTGCAAAA TGATGAAGGT
GAAATTATTG CGGAAGCCGA TCTCGCCTGG CCATCACAAA AATGGGCATT GATTATTGAT
AATCAAGAAT TTATTCCATT ATTCACAACC AGGGGTTGGC ACGTTGCATT CGGGCCAATT
GACGAAAATA CATTGCAACA TCTGTCCGGA GGTGACAAAT GA
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| Protein sequence | MLPSVVSRQV ADSVAAFLRA AFPLNSPLFN GENNDNVSML EQFLAQPETL LKGPYLSAQL
PFRKSDLPLN FFPNLTLPFP PHAHQARAFQ RLGSDAPQPT LVATGTGSGK TECFMFPLLN
HCAGASQAGV KAIIIYPMNA LATDQASRFA KTIASDPQLH GKVTVGLFVG DSEIEPSKKM
SAEKVITCKH TLRESPPDIL LTNYKMLDYL LMRPGDQPLW RYNQPGSLRY LVVDELHTFD
GAQGSDLACL VRRLKHHIGV DNQRFACVGT SATVGDELGQ LLDYAKTIFD QPFTDDAVIR
EDRYTAAEYL QNYAIAYSQY PGPEVASALD PQSYATPVAY LNGQIPLWFP DSDLQLPDDL
ESDDGREKRI ALGSLLRRHS VMHVLLHDLQ GGILSERECL ENLQVMLAES ADHARRVLQS
ILALIAQARL EVPETEHDRQ KRLQAKKARP VLPFVQLRSQ LWLREMRRLV ASVAKTPRLV
FADDVAVEDR EHYLPVIHCR DCHATGWASL RHGQSVQLET DLDGIYRQFF EKGRSIVLAF
PDNNEKAVSG AHQKLCPTCL KLNRQSSVQC GHCGHTELLQ VLIPDMLKER KDELEFANEC
PYCNSKQGIS ILGSRAASLS AVMIHQLYGS QFNEHKKLIT FSDSVQDAAH RASFFTARTW
PLMIRGQIAS VLSEKETLPL DAFAARVCQQ TRERSPDDAH FAANVIAPNM QWLNDYQTLK
NEGKLAENSD LPELVSLRLD WEVYSEFTLR ARIGRTLEAT GYAVAGVDKD RFNPAITALH
QQLCEELGDE MSGVSVEQVA HLALGVIWYQ RQAGAVMHPA FESYRRDGTT FMMTQKERTS
RYMPSIGPKT RKPAYASFEK INGFHRLIGA KSNPSWYQHW INRTLSNGNN LFISSVAETV
LRRLFTALKI AGVVKDFDTK GREAWGLVPS ALVVSRDVVQ LNCSCCREVV RAPADQGWQW
RNAPCLSLRC EGRYQEVDNT ATWRWENMDI ARVQGAEHTG LLSREDREVT EKSFYRGNQP
WNINLLSATP TLEMGIDVGD LSTVLLCSVP PAQANYLQRI GRAGRKDGNA LNITVAEGNP
HDQFFFEEPL EMMQGQVQAP GVFLNATAIL ERQLAAFCMD NWVKTGVPES AICKNVKQML
DELEFGRKSG FPYNLLRYIE QHHAEIAAQF TAIFPDLAAE TRQQLLSYLQ GAPGQRSLVQ
RIEEALKLLV EDRKSLRSRI DKLKRSIDKL ENAPRDQNFD SDMRELTSER QALMALVNQI
NNKQTLNFLT DEGLLPNYAF PEAGITLRSV LWRRKEGGEA REYQNTTFEY ERPASTALAE
LAPLNNFYAG GHKVEIEQID LKVSEPENWR ICSHCNYSEN IDQTGDQHKY CPKCGTPGWA
DAGQKTTLLK LRQVYARASA RDSQISDESD SREPAFFQRQ LLVSFEKEDV SAAYAIEEGE
VPFGFEFLSK VTLRDINFGK MADDANELMI AGEAKKRTGF KVCLGCGMVQ RPRDHEPRHD
LSCKYRTEPE KAKFEDYLYL YRQLESEALR ILLPVSSYSN DRVVEASLGA AIQLGLKHYF
KGNVDHLKGV VYREPENEGE SWRQYLVIYD TVPGGTGSLK ELMRTPDNLL KLLELAYQAI
VECSCNNDTH KDGCYRCVYA YRDRGRMKYV SRDQARLLLA KILQARDSIR VIDSIKNISL
EAMMGSELEK RFISCLQENK NLIVSRSYAH QGAGWIINTR SEPMMSWHLK AQVDLGAKEA
VGIPCRPDYV LYPLMQSDAI KPVAIFLDGF AFHKNSVAED VQKRQAIRDS GNFWVWTVTW
ADLKEPGLKH VQDVLGLGHN PDMKQPKFYN LFHDTNFAAL EASFRERNSF ALLLDYLADP
GGRTQLWQRM AAAHAWVWLD VKKSQDAGTK QKYAYEMQEN APAWRLAELL PDEPFVFGGL
LDSCNSSQQF IELASVLPQQ AIKPTTSVAQ MRSWLRLHIC FDDRYTQDDG YEAGLNGFWR
LVNLLQFLPD MTFTSRKAVH LPQESVDTKV SATPEAVPET DESWAEIIEF GLLSAEEIAL
LQSHSLSAPT LGYELQNDEG EIIAEADLAW PSQKWALIID NQEFIPLFTT RGWHVAFGPI
DENTLQHLSG GDK
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