| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5797 |
|---|
| Symbol | |
|---|
| ID | 6971130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 5431168 |
|---|
| End bp | 5431995 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643389427 |
|---|
| Product | prophage P4 integrase |
|---|
| Protein accession | YP_002273819 |
|---|
| Protein GI | 209400524 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.264973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTAA CGGATACTAA AGTTCGCTCT GCGAAACCTG AGGAGAAAGA GTATTCACTT
GTTGACGGCG ACGGCATGTC CTTACTTGTA AAACCTGGCG GTTCAAAGTA TTGGCGATTT
CGTTTCCGTT TTGGCGGTAA ACAACATTTG ATGGCGTTCG GCGTTTACCC GGATGTTTCA
CTGGCGGATG CGCGGAAGAA AAGGGAAGAG GCCAGAAAGC TGGTAGCTGC TGGTATCGAT
CCTCGTGAGC ATAAGCGTGC TGTGAAAGAA GAGCAGGCGA AAGAGATTAT TACTTTCGAG
AAGGTTGCCA GAGAGTGGCT CGTAACCAAC CAAAAATGGT CGGAAGATCA TGCTAATCGT
GTAAAAAAGA GCCTGGAGGA CAATATCTTC CCGACAATTG GTACTCGCAA CATTGCTGAA
CTAGGCACCC GTGATCTGTT AATTCCTATT AAAGCCGTGG AGAAATCCGG GCGTCTTGAA
GTGGCTTCCC GCCTTCAACA GCGCACCACG GCCATCATGC GTTATGCAGT GCAAAGCGGG
TTAATTGATT ACGATCCGGC GCAAGAGATG TCGGGGGCGG TTGCTTCCAG TAATCGACAG
CATCGTCCGG CGCTGGAGTT AAAGCGTATC CCTGAGTTGC TTGACAAAAT AGACAGCTAC
ACCGGCAGAC CGCTAACCCA CTGTACGACA GAACTCACTC TGCTTATCTT TATTCGGTCC
AGTAAGCTGC ATTTTGCTCG CTGGTCAGAA ATCGATTTTG AAACGTCAAT GTGGACCATC
CCTCTTGATT GGTATTGCAG TAAGCAGAGG GTTGGACTGG TACAGTAA
|
|---|
| Protein sequence | MALTDTKVRS AKPEEKEYSL VDGDGMSLLV KPGGSKYWRF RFRFGGKQHL MAFGVYPDVS
LADARKKREE ARKLVAAGID PREHKRAVKE EQAKEIITFE KVAREWLVTN QKWSEDHANR
VKKSLEDNIF PTIGTRNIAE LGTRDLLIPI KAVEKSGRLE VASRLQQRTT AIMRYAVQSG
LIDYDPAQEM SGAVASSNRQ HRPALELKRI PELLDKIDSY TGRPLTHCTT ELTLLIFIRS
SKLHFARWSE IDFETSMWTI PLDWYCSKQR VGLVQ
|
|---|
| |