| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5772 |
|---|
| Symbol | |
|---|
| ID | 6972045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 5404845 |
|---|
| End bp | 5405438 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643389402 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002273795 |
|---|
| Protein GI | 209400039 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACTA AAAAACAATC TCGCGTTCCA GGTCGTCCCA GACGTTTCGC TCCTGAGCAG
GCAGTCTCTG CGGCAAAAGT GCTTTTTCAC CAAAAAGGTT TCGATGCTGT CAGTGTTGCT
GAAGTTACTG ATTATCTTGG TATTAACCCC CCGAGCCTCT ACGCGGCTTT TGGCAGTAAG
GCTGGGTTAT TTAGCCGTGT ACTCAATGAA TATGTCGGTA CGGAAGCTAT TCCGCTTGTC
GATATTCTTC GTGATGATCG TCCGGTAGGG GAGTGCCTGG CTGAGGTATT AAAAGAAGCG
GCGCGCAGAT ATAGCCAAAA CGGCGGCTGC GCTGGCTGTA TGGTTCTTGA AGGCATTCAT
AGTCATGATC CACAAGCGCG TGATATTGCC GTTCAATATT ATCACGCCGC AGAAACGGCC
ATTTATGACT ATATCGCCAG GCTGCATCCA CAAAGCGCAC AATGTGTGAC TGATTTTATG
AGTACCGTGA TGTCAGGGCT TTCTGCGAAG GCACGAGAGG GGCACTCCCT CGAACAACTC
TGTGCAACTG CTGCACTGGC GGGGGAAGCG ATAAAAACTA TTCTCAAGGA GTGA
|
|---|
| Protein sequence | MVTKKQSRVP GRPRRFAPEQ AVSAAKVLFH QKGFDAVSVA EVTDYLGINP PSLYAAFGSK
AGLFSRVLNE YVGTEAIPLV DILRDDRPVG ECLAEVLKEA ARRYSQNGGC AGCMVLEGIH
SHDPQARDIA VQYYHAAETA IYDYIARLHP QSAQCVTDFM STVMSGLSAK AREGHSLEQL
CATAALAGEA IKTILKE
|
|---|
| |