Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5763 |
Symbol | treR |
ID | 6970790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 5397020 |
End bp | 5397967 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643389393 |
Product | trehalose repressor |
Protein accession | YP_002273786 |
Protein GI | 209398866 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | [TIGR02405] trehalose operon repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.693149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATC GGCTGACCAT CAAAGACATC GCGCGCTTAA GCGGCGTGGG GAAATCTACA GTTTCCCGGG TGCTGAATAA CGAAAGCGGC GTGAGCCAGC GCACCCGCGA GCGTGTTGAA GCAGTGATGA ATCAGCATGG ATTTTCCCCT TCCCGTTCTG CGCGCGCTAT GCGTGGGCAA AGCGATAAAG TGGTCGCCAT CATTGTTACC CGTCTGGATT CGTTGTCAGA AAATCTCGCC GTTCAAACCA TGCTGCCAGC GTTCTATGAA CAAGGTTACG ACCCAATCAT GATGGAAAGT CAGTTTTCCC CGCAATTAGT TGCCGAACAT TTGGGGGTGC TGAAACGGCG TAATATCGAC GGCGTAGTGC TGTTCGGTTT TACTGGCATA ACAGAAGAAA TGTTAGCCCA CTGGCAGTCA TCGCTGGTTC TGCTGGCGCG TGACGCAAAA GGCTTTGCTT CGGTCTGTTA TGACGACGAA GGGGCAATCA AGATCCTGAT GCAACGGCTG TATGACCAGG GGCATCGTAA TATCAGTTAT CTCGGCGTGC CGCACAGTGA CGTGACAACC GGTAAGCGAC GTCACGAAGC CTACCTGGCG TTCTGCAAAG CGCATAAACT GCATCCCGTT GCCGCCCTGC CAGGGCTTGC TATGAAGCAA GGCTATGAGA ACGTAGCAAA AGTGATTACG CCTGAAACTA CCGCCTTACT GTGCGCAACC GACACGCTGG CACTTGGCGC AAGTAAATAC CTGCAAGAGC AACGCATCGA CACCTTGCAA CTGGCGAGCG TCGGTAATAC GCCGTTAATG AAATTCCTTC ATCCGGAGAT CGTCACCGTA GATCCTGGTT ACGCCGAAGC TGGACGCCAG GCGGCTTGCC AGTTGATCGC GCAGGTAACC GGACGCAGCG AACCGCAACA AATCATCATC CCCGCCAACC TGTCCTGA
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Protein sequence | MQNRLTIKDI ARLSGVGKST VSRVLNNESG VSQRTRERVE AVMNQHGFSP SRSARAMRGQ SDKVVAIIVT RLDSLSENLA VQTMLPAFYE QGYDPIMMES QFSPQLVAEH LGVLKRRNID GVVLFGFTGI TEEMLAHWQS SLVLLARDAK GFASVCYDDE GAIKILMQRL YDQGHRNISY LGVPHSDVTT GKRRHEAYLA FCKAHKLHPV AALPGLAMKQ GYENVAKVIT PETTALLCAT DTLALGASKY LQEQRIDTLQ LASVGNTPLM KFLHPEIVTV DPGYAEAGRQ AACQLIAQVT GRSEPQQIII PANLS
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