Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5762 |
Symbol | treB |
ID | 6971206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 5395480 |
End bp | 5396901 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643389392 |
Product | PTS system trehalose(maltose)-specific transporter subunits IIBC |
Protein accession | YP_002273785 |
Protein GI | 209399645 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component [TIGR01992] PTS system, trehalose-specific IIBC component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.742409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAGCA AAATAAACCA AACGGATATC GATCGGTTGA TTGAACTGGT CGGCGGGCGC GGCAATATTG CGACGGTGAG CCACTGTATT ACTCGCCTGC GCTTTGTCCT CAACCAACCG GCCAATGCCA GACCGAAAGA AATTGAGCAA CTCCCCATGG TGAAAGGCTG TTTCACCAAT GCCGGGCAAT TTCAGGTGGT GATTGGCACC AACGTGGGTG ATTACTATCA AGCACTGATA GCGTCAACCG GACAGGCGCA GGTTGATAAA GAGCAGGTAA AAAAAGCCGC CCGGCAGAAT ATGAAATGGC ATGAGCAGTT GATCTCTCAT TTCGCAGAGA TCTTCTTCCC GTTGCTGCCC GCGTTGATTA GCGGCGGTTT GATCCTCGGT TTTCGCAATG TGATCGGCGA TTTGCCCATG AGCAACGGTC AAACGCTGGC GCAAATGTAC CCTTCCCTGC AAACGATCTA CGATTTTCTG TGGTTGATCG GTGAAGCGAT CTTCTTCTAC CTGCCGGTCG GGATTTGCTG GTCAGCGGTG AAAAAAATGG GCGGCACGCC GATCCTTGGT ATCGTGCTTG GCGTGACACT GGTTTCCCCC CAACTGATGA ACGCTTATCT GCTCGGGCAG CAGCTGCCGG AAGTGTGGGA CTTTGGCATG TTCAGCATCG CCAAAGTGGG CTATCAGGCG CAGGTGATCC CGGCACTGTT AGCCGGGCTG GCGCTGGGCG TTATTGAAAC TCGCCTTAAA CGCATCGTGC CGGATTACCT CTATCTGGTG GTGGTGCCCG TCTGTTCGCT GATCCTCGCG GTGTTCCTCG CCCATGCGCT GATTGGTCCG TTTGGTCGCA TGATTGGCGA TGGCGTTGCC TTTGCGGTAC GTCACCTGAT GACCGGCAGC TTTGCTCCGA TTGGCGCGGC ATTGTTTGGC TTCCTGTACG CCCCGCTGGT GATCACCGGT GTACACCAGA CCACGCTTGC TATTGATTTG CAGATGATTC AAAGCATGGG TGGTACGCCA GTGTGGCCGC TGATTGCGCT GTCGAATATC GCTCAGGGCT CCGCCGTGAT AGGCATTATC ATTTCCAGCC GCAAGCACAA TGAACGCGAG ATCTCCGTGC CTGCGGCGAT CTCCGCCTGG CTTGGGGTCA CTGAGCCTGC AATGTACGGC ATCAACCTGA AATATCGCTT CCCGATGCTG TGCGCGATGA TTGGTTCTGG TCTGGCAGGA TTGCTATGCG GCCTGAACGG CGTTATGGCG AATGGCATCG GCGTAGGCGG CCTGCCGGGA ATTCTCTCGA TTCAACCGAG CTACTGGCAG GTGTTTGCGC TGGCAATGGC TATCGCCATC ATCATCCCGA TTGTACTCAC CTCGTTTATC TATCAGCGGA AATACCGCCT GGGCACGCTG GACATTGTTT AA
|
Protein sequence | MMSKINQTDI DRLIELVGGR GNIATVSHCI TRLRFVLNQP ANARPKEIEQ LPMVKGCFTN AGQFQVVIGT NVGDYYQALI ASTGQAQVDK EQVKKAARQN MKWHEQLISH FAEIFFPLLP ALISGGLILG FRNVIGDLPM SNGQTLAQMY PSLQTIYDFL WLIGEAIFFY LPVGICWSAV KKMGGTPILG IVLGVTLVSP QLMNAYLLGQ QLPEVWDFGM FSIAKVGYQA QVIPALLAGL ALGVIETRLK RIVPDYLYLV VVPVCSLILA VFLAHALIGP FGRMIGDGVA FAVRHLMTGS FAPIGAALFG FLYAPLVITG VHQTTLAIDL QMIQSMGGTP VWPLIALSNI AQGSAVIGII ISSRKHNERE ISVPAAISAW LGVTEPAMYG INLKYRFPML CAMIGSGLAG LLCGLNGVMA NGIGVGGLPG ILSIQPSYWQ VFALAMAIAI IIPIVLTSFI YQRKYRLGTL DIV
|
| |