Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5754 |
Symbol | pmbA |
ID | 6971730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5388634 |
End bp | 5389974 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643389384 |
Product | peptidase PmbA |
Protein accession | YP_002273777 |
Protein GI | 209396110 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGTAA TCTCTCAAGT TGAAGCGCAG CGCAAGATTC TGGAAGAAGC AGTTTCCACT GCGCTGGAGT TGGCCTCAGG CAAATCGGAC GGTGCGGAAG TTGCCGTCAG CAAGACCACC GGCATTAGCG TAAGCACGCG TTATGGTGAA GTGGAGAATG TTGAATTCAA TAGCGATGGC GCGCTGGGGA TCACTGTTTA TCACCAGAAC CGCAAAGGTA GCGCATCATC CACCGATTTA AGCCCGCAGG CCATTGCCCG TACTGTACAG GCGGCGCTGG ATATTGCCCG TTATACCTCG CCAGATCCCT GTGCCGGCGT GGCAGACAAA GAGCTGCTGG CCTTTGACGC ACCGGATCTC GACTTGTTCC ACCCTGCGGA AGTTTCCCCG GATGAAGCCA TTGAACTGGC GGCCCGCGCA GAACAGGCGG CATTGCAGGC GGACAAACGC ATCACCAATA CCGAAGGTGG CAGCTTTAAC AGCCACTACG GTGTCAAAGT TTTTGGCAAC AGCCACGGCA TGTTGCAGGG TTACTGCTCA ACGCGTCATT CGCTCTCCAG CTGTGTAATT GCCGAAGAAA ATGGCGATAT GGAGCGTGAT TACGCCTACA CCATTGGCCG CGCGATGAGC GATTTGCAGA CGCCAGAGTG GGTCGGGGCC GATTGCGCTC GCCGTACTTT ATCGCGTCTG TCACCGCGTA AACTCTCCAC CATGAAAGCG CCGGTCATTT TTGCCAATGA AGTGGCAACC GGGCTTTTTG GGCATCTGGT GGGGGCGATA GCGGGTGGAT CGGTTTACCG TAAATCTACC TTCCTGCTGG ATTCGCTGGG TAAACAAATT CTGCCGGACT GGCTGACCAT TGAAGAGCAT CCGCATCTGC TGAAAGGGCT GGCATCGACG CCATTTGACA GCGAAGGTGT GCGCACCGAG CGTCGCGATA TTATTAAAGA TGGCATCCTG ACTCAGTGGC TGCTGACCAG CTACTCGGCG CGGAAACTGG GGCTGAAAAG CACCGGACAT GCGGGCGGTA TTCACAACTG GCGGATTGCC GGACAAGGTC TAAGCTTCGA GCAGATGCTC AAAGAGATGG GCACCGGGCT GGTGGTGACG GAATTGATGG GCCAGGGCGT GAGTGCAATT ACCGGTGATT ATTCCCGTGG TGCGGCGGGC TTCTGGGTAG AAAACGGCGA AATTCAGTAT CCGGTTAGCG AAATCACCAT CGCAGGTAAT TTAAAAGATA TGTGGCGCAA TATTGTCACC GTCGGTAACG ATATTGAAAC ACGCAGTAAT ATACAGTGTG GTTCTGTGCT GTTGCCGGAG ATGAAAATCG CCGGACAGTA A
|
Protein sequence | MKVISQVEAQ RKILEEAVST ALELASGKSD GAEVAVSKTT GISVSTRYGE VENVEFNSDG ALGITVYHQN RKGSASSTDL SPQAIARTVQ AALDIARYTS PDPCAGVADK ELLAFDAPDL DLFHPAEVSP DEAIELAARA EQAALQADKR ITNTEGGSFN SHYGVKVFGN SHGMLQGYCS TRHSLSSCVI AEENGDMERD YAYTIGRAMS DLQTPEWVGA DCARRTLSRL SPRKLSTMKA PVIFANEVAT GLFGHLVGAI AGGSVYRKST FLLDSLGKQI LPDWLTIEEH PHLLKGLAST PFDSEGVRTE RRDIIKDGIL TQWLLTSYSA RKLGLKSTGH AGGIHNWRIA GQGLSFEQML KEMGTGLVVT ELMGQGVSAI TGDYSRGAAG FWVENGEIQY PVSEITIAGN LKDMWRNIVT VGNDIETRSN IQCGSVLLPE MKIAGQ
|
| |