Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5728 |
Symbol | |
ID | 6970929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 5363838 |
End bp | 5364698 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643389361 |
Product | NmrA family protein |
Protein accession | YP_002273754 |
Protein GI | 209400216 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.045756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCTA TTACTGGTGC CACTGGCCAA CTTGGTCAGT ATGTTATTGA ATCCTTGATG AAAACGGTTC CTGCCAGCCA AATAGTGGCT ATCGTTCGTA ATCCGGCAAA AGCCCAGGCA CTGACAGCAC AAGGCATTAC CGTGCGTCAG GCTGACTACG GCGATGAAGC CGCACTGACA TCTGCACTTC AGGGAGTGGA AAAACTACTG CTGATCTCTT CCAGCGAAGT GGGTCAACGT GCCCCGCAGC ATCGTAATGT TATTAATGCC GCAAAGACGG CTGGCGTGAA ATTTATCGCT TATACCAGCC TGCTTCACGC GGATAAATCT CCGCTCGGCC TCGCCGATGA GCACATCGAG ACGGAGAAAA TGCTGGCTGA TTCTGGCATC GTTTACACCC TACTGCGCAA CGGCTGGTAC ACCGAAAACT ACCTCGCCAG CGCCCCGGCA GCACTGGAAC ACGGCGTATT TATCGGTGCG GCGGGCGATG GCAAAATCGC CTCAGCAACG CGGGCAGATT ATGCGGCAGC TGCGGCACGC GTGATTAGCG AAGCCGGTCA CGAAGGCAAG GTTTACGAAC TGGCGGGCGA TAGTGCCTGG ACGTTGACAC AGTTAGCGGC AGAGCTGACC AAACAGAGCG GCAAACAGGT TACCTATCAA AATCTGAGCG AAGCCGATTT CGCCGCGGCA CTGAAAAGCG TCGGACTGCC CGACGGACTG GCGGATATGC TGGCGGATTC TGACGTTGGC GCATCGAAAG GCGGTCTGTT TGATGACAGC AAAACACTTA GCAAATTGAT TGGCCACCCA ACGACAACGT TAGCCGAAAG CGTAAGCCAT CTTTTTAATG TTAATAACTA G
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Protein sequence | MIAITGATGQ LGQYVIESLM KTVPASQIVA IVRNPAKAQA LTAQGITVRQ ADYGDEAALT SALQGVEKLL LISSSEVGQR APQHRNVINA AKTAGVKFIA YTSLLHADKS PLGLADEHIE TEKMLADSGI VYTLLRNGWY TENYLASAPA ALEHGVFIGA AGDGKIASAT RADYAAAAAR VISEAGHEGK VYELAGDSAW TLTQLAAELT KQSGKQVTYQ NLSEADFAAA LKSVGLPDGL ADMLADSDVG ASKGGLFDDS KTLSKLIGHP TTTLAESVSH LFNVNN
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