Gene ECH74115_5727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5727 
Symbol 
ID6969786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5362765 
End bp5363730 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content56% 
IMG OID643389360 
Producthypothetical protein 
Protein accessionYP_002273753 
Protein GI209399773 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.229908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGCG GCGTGCTGTA CGCCCTGTTA GCAGGGTTGA TGTGGGGGCT TATTTTTGTC 
GGGCCGTTGA TCGTGCCGGA ATACCCGGCG ATGTTGCAGT CGATGGGGCG TTATCTGGCG
TTAGGGTTAA TTGCGCTGCC CATTGCCTGG CTGGGACGCG TGCGTCTGCG TCAGTTGGCG
CGTCGCGACT GGCTTACCGC CTTGATGCTC ACTATGATGG GCAACCTCAT CTATTACTTC
TGCCTTGCCA GTGCCATTCA ACGTACTGGT GCGCCTGTTT CCACGATGAT TATCGGCACC
CTGCCGGTGG TGATTCCCGT CTTCGCCAAT CTGCTTTATA GCCAGCGCGA CGGCAAACTC
GCGTGGGGAA AACTCGCCCC GGCACTGATT TGTATTGGCA TCGGCCTGGC GTGTGTGAAT
ATTGCTGAGT TAAACCACGG ACTCCCCAAT TTTGACTGGG CACGTTATAC CTCTGGCATC
GTGCTGGCGT TAGTTTCCGT GGTCTGCTGG GCGTGGTATG CCCTGCGCAA CGCCCGCTGG
CTGCGGGAAA ATCCCGACAA ACATCCGATG ATGTGGGCAA CAGCGCAGGC GCTGGTCACA
CTGCCGGTTT CACTTATCGG CTATCTCGTC GCTTGTTACT GGCTGAATAC GCAAACGCCG
GACTTCTCCC TACCCTTTGG CCCCCGTCCG CTGGTGTTTA TTAGTCTGAT GATTGCGATA
GCCGTGCTTT GCTCATGGGT TGGCGCACTC TGCTGGAACG TCGCCAGCCA GCGATTACCG
ACAGTGATTC TCGGGCCGCT GATTGTTTTC GAAACGCTGG CAGGTTTGCT GTACACCTTT
TTACTCCGCC AGCAAATGCC GCCGCTAATG ACGCTGAGCG GTATCGCGCT GTTAGTGATT
GGCGTGGTCA TCGCGGTTAG AGCAAAACCA GAAAAACCTT TAACTGAATC TGTCTCAGAA
AGTTGA
 
Protein sequence
MISGVLYALL AGLMWGLIFV GPLIVPEYPA MLQSMGRYLA LGLIALPIAW LGRVRLRQLA 
RRDWLTALML TMMGNLIYYF CLASAIQRTG APVSTMIIGT LPVVIPVFAN LLYSQRDGKL
AWGKLAPALI CIGIGLACVN IAELNHGLPN FDWARYTSGI VLALVSVVCW AWYALRNARW
LRENPDKHPM MWATAQALVT LPVSLIGYLV ACYWLNTQTP DFSLPFGPRP LVFISLMIAI
AVLCSWVGAL CWNVASQRLP TVILGPLIVF ETLAGLLYTF LLRQQMPPLM TLSGIALLVI
GVVIAVRAKP EKPLTESVSE S