Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5725 |
Symbol | cycA |
ID | 6967856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5360538 |
End bp | 5361950 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643389358 |
Product | D-alanine/D-serine/glycine permease |
Protein accession | YP_002273751 |
Protein GI | 209399441 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00067927 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGATC AGGTAAAAGT CGTTGCCGAT GATCAGGCTC CGGCTGAACA GTCGCTACGG CGCAATCTCA CAAACCGACA TATTCAGCTT ATTGCCATTG GTGGTGCCAT TGGTACGGGG TTGTTTATGG GGTCTGGCAA AACGATTAGC CTTGCCGGGC CGTCGATCAT TTTCGTTTAT ATGATCATTG GTTTTATGCT CTTTTTCGTG ATGCGGGCAA TGGGGGAATT GCTGCTTTCG AATCTGGAAT ACAAATCTTT TAGTGACTTC GCTTCCGATT TACTCGGGCC GTGGGCAGGA TATTTCACCG GCTGGACTTA CTGGTTCTGC TGGGTTGTAA CCGGTATGGC AGACGTGGTG GCGATCACGG CTTATGCTCA GTTCTGGTTC CCCGATCTCT CCGACTGGGT CGCCTCGCTG GCGGTGATAG TGCTGCTGCT GACGCTTAAC CTCGCCACTG TGAAAATGTT CGGTGAGATG GAGTTCTGGT TTGCGATGAT CAAAATCGTC GCCATTGTGT CGCTGATTGT CGTCGGCCTG GTCATGGTGG CGATGCACTT TCAGTCACCG ACTGGTGTGG AAGCGTCATT CGCGCATTTG TGGAATGACG GCGGCTGGTT CCCGAAAGGT TTAAGTGGCT TCTTTGCCGG ATTCCAGATA GCGGTTTTCG CTTTCGTGGG GATTGAGCTG GTAGGTACAA CAGCTGCGGA AACCAAAGAT CCAGAGAAAT CACTGCCACG CGCGATTAAC TCCATTCCGA TCCGTATCAT TATGTTCTAC GTCTTCGCGC TGATTGTTAT TATGTCCGTG ACGCCGTGGA GTTCGGTAGT CCCGGAGAAA AGCCCGTTTG TTGAACTGTT TGTGTTGGTA GGTTTGCCTG CGGCTGCCAG CGTGATCAAC TTTGTGGTGC TGACCTCTGC GGCGTCTTCC GCTAACAGTG GCGTCTTCTC TACCAGCCGT ATGCTGTTTG GTCTGGCGCA GGAAGGTGTG GCACCGAAAG CGTTCGCTAA ACTTTCTAAG CGCGCAGTAC CCGCGAAAGG GTTGACTTTC TCGTGTATCT GTCTGCTCGG CGGCGTGGTG ATGTTGTATG TGAATCCTAG CGTGATTGGC GCGTTCACGA TGATTACAAC CGTTTCCGCG ATTCTGTTTA TGTTCGTCTG GACGATTATC CTTTGCTCGT ACCTTGTGTA TCGCAAACAG CGTCCTCATC TACATGAGAA GTCGATCTAC AAGATGCCGC TCGGCAAGCT GATGTGCTGG GTATGTATGG CGTTCTTTGT GTTCGTGGTC GTGTTGCTGA CACTGGAAGA TGACACTCGC CAGGCGCTGC TGGTTACCCC GCTGTGGTTT ATCGCGCTGG GGCTGGGCTG GTTGTTTATT GGTAAGAAGC GGGCTGCTGA ACTGCGGAAA TAA
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Protein sequence | MVDQVKVVAD DQAPAEQSLR RNLTNRHIQL IAIGGAIGTG LFMGSGKTIS LAGPSIIFVY MIIGFMLFFV MRAMGELLLS NLEYKSFSDF ASDLLGPWAG YFTGWTYWFC WVVTGMADVV AITAYAQFWF PDLSDWVASL AVIVLLLTLN LATVKMFGEM EFWFAMIKIV AIVSLIVVGL VMVAMHFQSP TGVEASFAHL WNDGGWFPKG LSGFFAGFQI AVFAFVGIEL VGTTAAETKD PEKSLPRAIN SIPIRIIMFY VFALIVIMSV TPWSSVVPEK SPFVELFVLV GLPAAASVIN FVVLTSAASS ANSGVFSTSR MLFGLAQEGV APKAFAKLSK RAVPAKGLTF SCICLLGGVV MLYVNPSVIG AFTMITTVSA ILFMFVWTII LCSYLVYRKQ RPHLHEKSIY KMPLGKLMCW VCMAFFVFVV VLLTLEDDTR QALLVTPLWF IALGLGWLFI GKKRAAELRK
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