| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5647 |
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| Symbol | ldcC2 |
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| ID | 6969386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 5286120 |
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| End bp | 5288267 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643389281 |
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| Product | lysine decarboxylase, constitutive |
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| Protein accession | YP_002273678 |
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| Protein GI | 209399154 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTA TTGCAATATT GAATCACATG GGGGTTTATT TTAAAGAAGA ACCCATCCGT
GAACTTCATC GCGCGCTTGA ACGTCTGAAC TTCCAGATTG TTTACCCGAA CGACCGTGAC
GACTTATTAA AACTGATCGA AAACAATGCG CGTCTGTGCG GCGTTATTTT TGACTGGGAT
AAATATAATC TCGAGCTGTG CGAAGAAATT AGCAAAATGA ACGAGAACCT GCCGTTGTAC
GCGTTCGCTA ATACGTATTC CACTCTCGAT GTAAGCCTGA ATGACCTGCG TTTACAGATT
AGCTTCTTTG AATATGCGCT GGGTGCTGCT GAAGATATTG CTAACAAGAT CAAGCAGACC
ACTGACGAAT ATATCAACAC TATTCTGCCT CCGCTGACTA AAGCACTGTT TAAATATGTT
CGTGAAGGTA AATATACTTT CTGTACTCCT GGTCACATGG GTGGTACTGC ATTCCAGAAA
AGCCCGGTAG GTAGCCTGTT CTATGATTTC TTTGGTCCGA ATACCATGAA ATCTGATATT
TCCATTTCAG TATCTGAACT GGGTTCTCTG CTGGATCACA GTGGTCCACA CAAAGAAGCA
GAACAGTATA TCGCTCGCGT CTTTAACGCA GACCGCAGCT ACATGGTGAC CAACGGTACT
TCCACTGCGA ACAAAATTGT TGGTATGTAC TCTGCTCCGG CAGGCAGCAC CATTCTGATT
GACCGTAACT GCCACAAATC GCTGACCCAC CTGATGATGA TGAGCGATGT TACGCCAATC
TATTTCCGCC CGACCCGTAA CGCTTACGGT ATTCTTGGTG GTATCCCACA GAGTGAATTC
CAGCACGCTA CCATTGCTAA GCGCGTGAAA GAAACACCAA ACGCAACCTG GCCGGTACAT
GCTGTAATTA CCAACTCTAC CTATGATGGT CTGCTGTACA ACACCGACTT CATCAAGAAA
ACACTGGATG TGAAATCCAT CCACTTTGAC TCCGCGTGGG TGCCTTACAC CAACTTCTCA
CCGATTTACG AAGGTAAATG CGGTATGAGC GGTGGCCGTG TAGAAGGGAA AGTGATTTAC
GAAACCCAGT CCACTCACAA ACTGCTGGCG GCGTTCTCTC AGGCTTCCAT GATCCACGTT
AAAGGTGACG TAAACGAAGA AACCTTTAAC GAAGCCTACA TGATGCACAC CACCACTTCT
CCGCACTACG GTATCGTGGC GTCCACTGAA ACCGCTGCGG CGATGATGAA AGGCAATGCA
GGTAAGCGTC TGATCAACGG TTCCATTGAA CGTGCGATCA AATTCCGTAA AGAGATCAAA
CGTCTGAGAA CGGAATCTGA TGGCTGGTTC TTTGATGTAT GGCAGCCGGA TCATATCGAT
ACGACTGAAT GCTGGCCGCT GCGTTCTGAC AGCACCTGGC ACGGCTTCAA AAACATCGAT
AACGAGCACA TGTATCTTGA CCCGATCAAA GTCACCCTGC TGACTCCGGG GATGGAAAAA
GACGGCACCA TGAGCGACTT TGGTATTCCG GCCAGCATCG TGGCGAAATA CCTCGACGAA
CATGGCATCG TTGTTGAGAA AACCGGTCCG TATAACCTGC TGTTCCTGTT CAGCATCGGT
ATCGATAAGA CCAAAGCACT GAGCCTGCTG CGTGCTCTGA CTGACTTCAA ACGTGCGTTC
GACCTGAACC TGCGTGTGAA AAACATGCTG CCGTCTCTGT ATCGTGAAGA TCCTGAATTC
TATGAAAACA TGCGTATTCA GGAACTGGCT CAGAATATCC ACAAACTGAT TGTTCACCAC
AATCTGCCGG ATCTGATGTA TCGCGCATTT GAAGTGCTGC CGACGATGGT AATGACTCCG
TATGCTGCAT TCCAGAAAGA GCTGCACGGT ATGACCGAAG AAGTTTACCT CGACGAAATG
GTCGGTCGTA TTAACGCCAA TATGATCCTT CCGTATCCGC CGGGAGTTCC TCTGGTAATG
CCGGGTGAAA TGATCACCGA AGAAAGCCGT CCGGTTCTGG AGTTCCTGCA GATGCTGTGT
GAAATCGGCG CTCACTATCC GGGCTTTGAA ACCGATATTC ACGGTGCATA CCGTCAGGCT
GATGGCCGCT ATACCGTTAA GGTATTGAAA GAAGAAAGCA AAAAATAA
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| Protein sequence | MNVIAILNHM GVYFKEEPIR ELHRALERLN FQIVYPNDRD DLLKLIENNA RLCGVIFDWD
KYNLELCEEI SKMNENLPLY AFANTYSTLD VSLNDLRLQI SFFEYALGAA EDIANKIKQT
TDEYINTILP PLTKALFKYV REGKYTFCTP GHMGGTAFQK SPVGSLFYDF FGPNTMKSDI
SISVSELGSL LDHSGPHKEA EQYIARVFNA DRSYMVTNGT STANKIVGMY SAPAGSTILI
DRNCHKSLTH LMMMSDVTPI YFRPTRNAYG ILGGIPQSEF QHATIAKRVK ETPNATWPVH
AVITNSTYDG LLYNTDFIKK TLDVKSIHFD SAWVPYTNFS PIYEGKCGMS GGRVEGKVIY
ETQSTHKLLA AFSQASMIHV KGDVNEETFN EAYMMHTTTS PHYGIVASTE TAAAMMKGNA
GKRLINGSIE RAIKFRKEIK RLRTESDGWF FDVWQPDHID TTECWPLRSD STWHGFKNID
NEHMYLDPIK VTLLTPGMEK DGTMSDFGIP ASIVAKYLDE HGIVVEKTGP YNLLFLFSIG
IDKTKALSLL RALTDFKRAF DLNLRVKNML PSLYREDPEF YENMRIQELA QNIHKLIVHH
NLPDLMYRAF EVLPTMVMTP YAAFQKELHG MTEEVYLDEM VGRINANMIL PYPPGVPLVM
PGEMITEESR PVLEFLQMLC EIGAHYPGFE TDIHGAYRQA DGRYTVKVLK EESKK
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