Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5636 |
Symbol | fumB |
ID | 6971511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 5275330 |
End bp | 5276976 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643389270 |
Product | fumarate hydratase |
Protein accession | YP_002273667 |
Protein GI | 209400759 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAACA AACCCTTTAT CTACCAGGCA CCTTTCCCGA TGGGGAAAGA CAATACCGAA TACTATCTAC TCACTTCCGA TTACGTTAGC GTTGCCGACT TCGACGGCGA AACCATCCTG AAAGTGGAAC CAGAAGCCCT GACCCTGCTG GCGCAGCAAG CCTTCCACGA CGCTTCTTTC ATGCTCCGTC CGGCACACCA GAAACAGGTT GCGGCTATTC TTCACGATCC AGAAGCCAGC GAAAACGACA AGTACGTGGC ACTGCAATTC TTAAGAAACT CCGAAATCGC CGCCAAAGGC GTGCTGCCGA CCTGCCAGGA TACCGGCACC GCGATCATCG TCGGTAAAAA AGGCCAGCGC GTGTGGACCG GTGGCGGTGA TGAAGAAGCG CTGTCGAAAG GCGTCTATAA CACCTATATC GAAGATAACC TGCGCTACTC GCAAAACGCG GCGCTGGACA TGTACAAAGA GGTCAACACC GGCACTAACC TGCCTGCGCA AATCGACCTG TACGCGGTAG ATGGCGATGA GTACAAATTC CTTTGCGTTG CGAAAGGCGG CGGCTCTGCC AACAAAACCT ATCTCTACCA GGAAACCAAA GCCCTGCTGA CTCCCGGCAA ACTGAAAAAC TTCCTCGTCG AGAAAATGCG TACCCTCGGT ACTGCAGCCT GCCCGCCGTA CCATATCGCG TTTGTGATTG GCGGTACGTC TGTGGAAACC AACCTGAAAA CCGTTAAGTT AGCAAGCGCT CACTATTACG ATGAACTGCC GACGGAAGGG AACGAACATG GTCAGGCGTT CCGCGATGTC CAGCTGGAAC AGGAACTGCT GGAAGAGGCC CAGAAACTCG GTCTTGGCGC GCAGTTTGGC GGTAAATACT TCGCGCACGA CATTCGCGTT ATCCGTCTGC CACGTCACGG CGCATCCTGC CCGGTAGGCA TGGGCGTCTC CTGCTCCGCT GACCGTAACA TTAAAGCGAA AATCAACCGC GAAGGTATCT GGATCGAAAA ACTGGAACAC CATCCAGGTC AGTACATTCC ACAAGAACTG CGCCAGGCCG GTGAAGGCGA AGCGGTGAAG GTCGACCTTA ACCGCCCGAT GAAAGAGATC CTCGCCCAGC TTTCGCAATA TCCGGTTTCC ACTCGTTTGT CGCTCACCGG CACCATTATC GTGGGCCGAG ATATTGCACA CGCCAAGCTG AAAGAGCTGA TTGACGCCGG TAAAGAACTT CCGCAGTACA TCAAAGATCA CCCGATCTAC TACGCGGGTC CGGCGAAAAC CCCTGCCGGT TATCCATCAG GCTCACTTGG CCCAACCACC GCAGGTCGTA TGGACTCCTA TGTGGATCTG CTGCAATCCC ACGGCGGCAG CATGATCATG CTAGCGAAAG GTAACCGCAG TCAGCAGGTT ACCGACGCGT GTCATAAACA CGGCGGCTTC TACCTCGGTA GCATCGGCGG TCCGGCGGCG GTACTGGCGC AGCAGAGCAT CAAGCATCTG GAATGCGTCG CTTATCCGGA GCTGGGTATG GAAGCTATCT GGAAAATCGA AGTAGAAGAT TTCCCGGCGT TTATCCTGGT CGATGACAAA GGTAACGACT TCTTCCAGCA AATCATCAAC AAACAGTGCG CGAACTGCAC TAAGTAA
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Protein sequence | MSNKPFIYQA PFPMGKDNTE YYLLTSDYVS VADFDGETIL KVEPEALTLL AQQAFHDASF MLRPAHQKQV AAILHDPEAS ENDKYVALQF LRNSEIAAKG VLPTCQDTGT AIIVGKKGQR VWTGGGDEEA LSKGVYNTYI EDNLRYSQNA ALDMYKEVNT GTNLPAQIDL YAVDGDEYKF LCVAKGGGSA NKTYLYQETK ALLTPGKLKN FLVEKMRTLG TAACPPYHIA FVIGGTSVET NLKTVKLASA HYYDELPTEG NEHGQAFRDV QLEQELLEEA QKLGLGAQFG GKYFAHDIRV IRLPRHGASC PVGMGVSCSA DRNIKAKINR EGIWIEKLEH HPGQYIPQEL RQAGEGEAVK VDLNRPMKEI LAQLSQYPVS TRLSLTGTII VGRDIAHAKL KELIDAGKEL PQYIKDHPIY YAGPAKTPAG YPSGSLGPTT AGRMDSYVDL LQSHGGSMIM LAKGNRSQQV TDACHKHGGF YLGSIGGPAA VLAQQSIKHL ECVAYPELGM EAIWKIEVED FPAFILVDDK GNDFFQQIIN KQCANCTK
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