Gene ECH74115_5598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5598 
Symbol 
ID6967458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5237351 
End bp5238034 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content52% 
IMG OID643389234 
Producthypothetical protein 
Protein accessionYP_002273631 
Protein GI209397336 
COG category[R] General function prediction only 
COG ID[COG3822] ABC-type sugar transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.918014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT CCGCTATAAA CGACATTCTC GGCCATACAC GGCAATTCTT TTCGCAACAT 
GACGTACATC TGCCGCCCTT TGCCAGTTTC TCGCCTGCTC AATGGCAGCA GCTCGACACC
GCCGCGTGGG AGGAGGTTTT TGATCTTAAA CTCGGCTGGG ATGTTACCGC TTTTGGTCGC
AACAACTTTG CAGCACACGG GCTGACGCTG TTTACCCTAC GTAACGGCTC AGCAAAAGGA
ATGCCGTATG TGAAATGTTA CGCCGAGAAG ATCATGCATG TGCGCGATGC GCAGGTCACG
CCAATGCATT TTCACTGGCG TAAGCGTGAG GACATTATCA ATCGCGGCGG CGGTAATTTA
ATTGTTGAAC TGTGGAATGC CGATAGTAAC GAGCAAACGG CTGATAGTGA CATTACGGTG
GTGATAGACG GCTGCCGCCA GAAACATACT GCAGGCTCTC AGTTGCGCCT GTCTCCCGGC
GAAAGTATCT GCCTGCCGCC CGGCCTGTAT CACAGCTTTT GGGCAGAAGC CGGTTTTGGC
GATGTGCTGG TTGGCGAAGT CTCTTCTGTT AATGACGACG ACCACGATAA CCACTTTTTA
CAGCCACTGG ACCGCTACAA CCTGATTGAC GAAGACGAAC CTGCACAGTT GGTATTGTGT
AACGAATACC GCCAGTTCCG CTGA
 
Protein sequence
MKRSAINDIL GHTRQFFSQH DVHLPPFASF SPAQWQQLDT AAWEEVFDLK LGWDVTAFGR 
NNFAAHGLTL FTLRNGSAKG MPYVKCYAEK IMHVRDAQVT PMHFHWRKRE DIINRGGGNL
IVELWNADSN EQTADSDITV VIDGCRQKHT AGSQLRLSPG ESICLPPGLY HSFWAEAGFG
DVLVGEVSSV NDDDHDNHFL QPLDRYNLID EDEPAQLVLC NEYRQFR