Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5590 |
Symbol | mdtN |
ID | 6970640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 5230964 |
End bp | 5231995 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643389226 |
Product | multidrug resistance protein MdtN |
Protein accession | YP_002273623 |
Protein GI | 209400246 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGTA CGCCGAAAAA AGCTCCTCGC AGTAAATTCC CTGCTCTGTT AGTGGTTGCG TTGGCGCTGG TTGCCCTTGT TTTCGTTATC TGGCGCGTAG ACAGTGCGCC ATCAACTAAT GACGCTTACG TGTCAGCAGA TACCATTGAT GTGGTGCCGG AAGTCAGCGG CCGCATTGTA GAACTGGCGG TCACCGACAA CCAGGCAGTC AAACAGGGCG ATTTGCTGTT CCGCATTGAC CCGCGCCCGT ACGAAGCCAA TCTGGCGAAA TCTGAAGCCT CCCTCGCGGC ACTGGATAAG CAAATTATGC TCACCCAGCG TAGCGTTGAC GCGCAACAGT TTGGTGCCGA CTCGGTTAAC GCCACGGTAG AAAAAGCCCG TGCCGCCGCT AAACAGGCCA CAGATACATT ACGCCGCACC GAGCCATTAC TGAAAGAAGG TTTTGTCTCA GCGGAAGACG TTGACCGTGC GAGGACCGCG CAGCGCGCTG CAGAAGCCGA TCTTAATGCT GTATTGTTGC AGGCGCAGTC AGCCGCCAGC GCCGTCAGCG GCGTGGATGC ATTAGTTGCC CAGCGTGCGG CGGTCGAAGC GGATATTGCC CTGACCAAAC TGCATCTGGA AATGGCGACC GTTCGCGCAC CGTTTGATGG CCGGGTCATT TCCCTCAAAA CCTCCGTCGG GCAATTTGCT TCTGCCATGC GCCCTATTTT TACCCTAATC GACACTCGTC ACTGGTACGT GATCGCCAAC TTCCGCGAAA CCGATCTGAA AAATATTCGC TCAGGTACAC CTGCAACGAT TCGCCTGATG AGTGACAGCG GCAAAACTTT CGAGGGTAAA GTGGATTCAA TTGGCTACGG CGTGCTACCG GATGACGGCG GCCTGGTGCT GGGCGGCCTG CCGAAAGTTT CTCGTTCTAT TAACTGGGTC CGTGTTGCCC AGCGTTTTCC GGTCAAAATC ATGGTTGATA AACCTGACCC GGAAATGTTC CGCATCGGCG CTTCGGCAGT CGCTAATCTT GAGCCGCAAT AA
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Protein sequence | MESTPKKAPR SKFPALLVVA LALVALVFVI WRVDSAPSTN DAYVSADTID VVPEVSGRIV ELAVTDNQAV KQGDLLFRID PRPYEANLAK SEASLAALDK QIMLTQRSVD AQQFGADSVN ATVEKARAAA KQATDTLRRT EPLLKEGFVS AEDVDRARTA QRAAEADLNA VLLQAQSAAS AVSGVDALVA QRAAVEADIA LTKLHLEMAT VRAPFDGRVI SLKTSVGQFA SAMRPIFTLI DTRHWYVIAN FRETDLKNIR SGTPATIRLM SDSGKTFEGK VDSIGYGVLP DDGGLVLGGL PKVSRSINWV RVAQRFPVKI MVDKPDPEMF RIGASAVANL EPQ
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