| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5578 |
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| Symbol | nrfD |
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| ID | 6967148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5218826 |
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| End bp | 5219782 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643389217 |
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| Product | nrfD protein |
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| Protein accession | YP_002273614 |
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| Protein GI | 209398055 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA CTTCCGCATT TCATTTTGAA TCGCTGGTGT GGGACTGGCC GATTGCCATC
TACCTGTTTT TGATTGGTAT TTCTGCCGGT CTGGTGACGC TGGCCGTGCT GTTACGTCGC
TTCTACCCGC AGGCGGGCGG TGCAGACAGC ACGTTGCTGC GCACCACGCT GATTGTCGGA
CCTGGCGCGG TGATCCTCGG TCTGTTGAGC CTCGTCTTCC ACCTGACAAG ACCGTGGACC
TTCTGGAAGC TGATGTTCCA CTACAGTTTT ACTTCGGTGA TGTCGATGGG GGTGATGCTG
TTTCAGCTTT ACATGGTGGT GCTGGTGCTG TGGCTGGCGA AAATCTTTGA ACATGATTTG
CTTGCCCTGC AACAACGCTG GTTGCCGAAG CTGGGGATCG TGCAAAAGGT TCTGAGCCTG
CTGACGCCCG TTCATCGCGG ACTGGAAACA TTGATGCTGG TGCTGGCGGT GTTGTTGGGG
GCTTATACCG GTTTTCTGCT GTCGGCGCTG AAATCGTATC CGTTCCTTAA TAACCCGATC
CTGCCGGTGC TGTTCCTCTT CTCCGGCATC TCGTCCGGTG CGGCGGTGGC ACTGATCGCC
ATGGCGATAC GCCAACGCAG TAACCCGCAT TCCACGGAAG CGCAGTTTGT ACACCGTATG
GAAATCCCCG TGGTATGGGG TGAAATCTTC CTGCTGGCGG CGTTTTTTGT CGGTCTGGCG
CTGGGCGATG ACGGTAAAGT GCGTGCGCTG GTGGCGGCAT TGGGCGGCGG TTTCTGGACG
TGGTGGTTCT GGCTTGGTGT CGCCGGGCTG GGGCTGATTG TGCCAATGTT GTTCAAACCG
TGGGTCAATC GCAGTTCCGG CATTCCTGCC GTGCTGGCGG CGTGTGGGGC CAGTCTGGTC
GGCGTGTTGA TGTTGCGATT TTTCATTCTC TACGCCGGGC AGTTAACGGT GGCGTAA
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| Protein sequence | MTQTSAFHFE SLVWDWPIAI YLFLIGISAG LVTLAVLLRR FYPQAGGADS TLLRTTLIVG
PGAVILGLLS LVFHLTRPWT FWKLMFHYSF TSVMSMGVML FQLYMVVLVL WLAKIFEHDL
LALQQRWLPK LGIVQKVLSL LTPVHRGLET LMLVLAVLLG AYTGFLLSAL KSYPFLNNPI
LPVLFLFSGI SSGAAVALIA MAIRQRSNPH STEAQFVHRM EIPVVWGEIF LLAAFFVGLA
LGDDGKVRAL VAALGGGFWT WWFWLGVAGL GLIVPMLFKP WVNRSSGIPA VLAACGASLV
GVLMLRFFIL YAGQLTVA
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