Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5577 |
Symbol | nrfC |
ID | 6967843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5218158 |
End bp | 5218829 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643389216 |
Product | cytochrome c nitrite reductase, Fe-S protein |
Protein accession | YP_002273613 |
Protein GI | 209396255 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03149] cytochrome c nitrite reductase, Fe-S protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGGT CTCGTCGCCA GTTTCTCACC GGCGTCGGCG TGCTGGCAGC CGTCAGCGGC ACCGCAGGGC GCGTGGTGGC GAAAACGTTG AATATCAATG GGGTGCGTTA CGGCATGGTG CATGACGAGT CGTTATGCAT CGGCTGTACC GCCTGTATGG ATGCTTGTCG GGAAGTGAAC AAGGTGCCGG AAGGCGTCTC GCGCCTGACG ATTATTCGTA GCGAGCCGCA GGGCGAATTT CCTGATGTGA AATATCGCTT CTTCCGTAAG TCTTGCCAGC ACTGCGATCA TGCGCCGTGC GTTGACGTCT GCCCGACCGG TGCATCTTTT CGCGATGCTG CCAGTGGGAT TGTCGATGTT AATCCGGATC TCTGCGTCGG TTGTCAGTAC TGCATCGCCG CCTGTCCGTA CCGCGTGCGC TTTATTCATC CGGTCACGAA GACAGCGGAC AAATGCGATT TCTGCCGTAA GACCAATTTG CAGGCCGGTA AGCTTCCCGC GTGCGTTGAG GCTTGCCCGA CGAAGGCGCT GACGTTTGGC AATCTGGACG ATCCCAACAG TGAGATTTCG CAACTGCTGC GCCAGAAGCC CACTTACCGC TACAAGCTGG CGCTGGGAAC CAAACCGAAG CTGTACCGCG TACCGTTTAA ATACGGGGAG GTGAGCCAAT GA
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Protein sequence | MTWSRRQFLT GVGVLAAVSG TAGRVVAKTL NINGVRYGMV HDESLCIGCT ACMDACREVN KVPEGVSRLT IIRSEPQGEF PDVKYRFFRK SCQHCDHAPC VDVCPTGASF RDAASGIVDV NPDLCVGCQY CIAACPYRVR FIHPVTKTAD KCDFCRKTNL QAGKLPACVE ACPTKALTFG NLDDPNSEIS QLLRQKPTYR YKLALGTKPK LYRVPFKYGE VSQ
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