| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5565 |
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| Symbol | soxS |
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| ID | 6970813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 5205407 |
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| End bp | 5205730 |
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| Gene Length | 324 bp |
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| Protein Length | 107 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643389205 |
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| Product | DNA-binding transcriptional regulator SoxS |
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| Protein accession | YP_002273602 |
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| Protein GI | 209398875 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.601347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCATC AGAAAATTAT TCAGGATCTT ATCGCATGGA TTGACGAGCA TATTGACCAG
CCGCTTAACA TTGATGTCGT CGCAAAAAAA TCAGGCTATT CAAAGTGGTA CCTGCAACGG
ATGTTCCGCA CGGTGACGCA TCAGACGCTT GGCGATTACA TTCGTCAACG CCGTCTGTTA
CTGGCCGCCG TTGAGTTGCG CACCACCGAG CGTCCGATTT TTGATATCGC AATGGACCTG
GGTTATGTCT CTCAGCAGAC CTTCTCCCGC GTTTTCCGTC GGCAGTTTGA TCGCACTCCC
AGCGATTATC GCCACCGCCT GTAG
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| Protein sequence | MSHQKIIQDL IAWIDEHIDQ PLNIDVVAKK SGYSKWYLQR MFRTVTHQTL GDYIRQRRLL
LAAVELRTTE RPIFDIAMDL GYVSQQTFSR VFRRQFDRTP SDYRHRL
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