Gene ECH74115_5560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5560 
Symbol 
ID6970709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5199005 
End bp5199361 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content51% 
IMG OID643389200 
Producthypothetical protein 
Protein accessionYP_002273597 
Protein GI209399431 
COG category[S] Function unknown 
COG ID[COG2315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.476259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTT CGGAGTTGCT ACAATATTGC ATGGCAAAAC CAGGCGCAGA ACAGAGCGAG 
CATAACGACT GGAAAGCGAC GCAGATCAAA GTGGAAGATG TACTGTTTGC GATGGTGAAA
GAAGTAGAAA ATCGCCCAGC TGTTTCGCTG AAAACCAGCC CGGAGCTGGC GGAGCTGCTA
CGTCAGCAGC ACAGCGATGT GCGTCCAAGC CGCCATCTGA ATAAAGCGCA CTGGAGCACC
GTGTATCTCG ACGGTTCGCT GCCGGATTCG CAAATCTATT ATCTGGTGGA TGCGTCTTAT
CAGCAGGCGG TGAATTTACT GCCGGAAGAA AAACGTAAAT TGCTGGTGCA ACTCTGA
 
Protein sequence
MTISELLQYC MAKPGAEQSE HNDWKATQIK VEDVLFAMVK EVENRPAVSL KTSPELAELL 
RQQHSDVRPS RHLNKAHWST VYLDGSLPDS QIYYLVDASY QQAVNLLPEE KRKLLVQL