| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5551 |
|---|
| Symbol | dusA |
|---|
| ID | 6968138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 5190024 |
|---|
| End bp | 5191061 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643389192 |
|---|
| Product | tRNA-dihydrouridine synthase A |
|---|
| Protein accession | YP_002273589 |
|---|
| Protein GI | 209398005 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGATA ATCATGAAGC ACAAAAAATT AATCAAACCA GCGTGATGCC TGAAAAAACT
GGTGTTTACT GGAATTCTCG GTTTAGCGTT GCACCAATGC TCGACTGGAC GGACAGACAT
TGCCGCTATT TCTTGCGTCT GCTTTCCCGC AATACGTTGC TGTATACCGA AATGGTGACT
ACAGGGGCGA TTATTCACGG TAAAGGTGAT TACCTGGCGT ACAGTGAAGA AGAACATCCG
GTAGCGTTGC AACTCGGCGG TAGCGATCCG GCGGCGCTGG CGCAGTGTGC GAAGCTGGCA
GAAGCGCGTG GATATGATGA GATCAACCTG AATGTCGGCT GCCCGTCTGA CCGGGTGCAG
AACGGCATGT TTGGTGCGTG TCTGATGGGT AATGCGCAGC TGGTTGCCGA CTGCGTGAAA
GCGATGCGCG ATGTGGTGTC GATTCCGGTG ACGGTGAAAA CGCGTATTGG CATCGATGAC
CAGGACAGCT ATGAATTTCT CTGCGATTTC ATCAACACCG TTTCCGGCAA AGGCGAGTGT
GAGATGTTCA TCATCCACGC ACGTAAAGCC TGGCTTTCGG GGTTAAGCCC GAAAGAAAAC
CGTGAAATCC CGCCGCTCGA TTATCCGCGT GTGTATCAAC TGAAGCGTGA CTTTCTGCAT
CTGACGATGT CGATTAACGG TGGTATCAAG TCGCTGGAAG AGGCTAAAGC GCATTTGCAA
CATATGGATG GCGTGATGGT CGGGCGCGAA GCGTATCAGA ATCCGGGTAT TCTGGCGGCG
GTAGACCGAG AGATCTTTGG TTCCTCGGAT ACCGATGCCG ATCCGGTGGC GGTAGTGCGC
GCCATGTATC CGTACATTGA GCGTGAACTC AGCCAGGGGA CGTATCTTGG CCATATTACC
CGGCATATGT TGGGCTTGTT CCAGGGTATT CCTGGCGCGC GGCAGTGGCG GCGTTATTTA
AGTGAAAATG CCCATAAAGC GGGTGCAGAC ATTAACGTGC TGGAACACGC GCTCAAACTG
GTGGCGGATA AGCGTTAA
|
|---|
| Protein sequence | MHDNHEAQKI NQTSVMPEKT GVYWNSRFSV APMLDWTDRH CRYFLRLLSR NTLLYTEMVT
TGAIIHGKGD YLAYSEEEHP VALQLGGSDP AALAQCAKLA EARGYDEINL NVGCPSDRVQ
NGMFGACLMG NAQLVADCVK AMRDVVSIPV TVKTRIGIDD QDSYEFLCDF INTVSGKGEC
EMFIIHARKA WLSGLSPKEN REIPPLDYPR VYQLKRDFLH LTMSINGGIK SLEEAKAHLQ
HMDGVMVGRE AYQNPGILAA VDREIFGSSD TDADPVAVVR AMYPYIEREL SQGTYLGHIT
RHMLGLFQGI PGARQWRRYL SENAHKAGAD INVLEHALKL VADKR
|
|---|
| |