Gene ECH74115_5538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5538 
Symbol 
ID6970489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5182152 
End bp5182688 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content47% 
IMG OID643389179 
Producthypothetical protein 
Protein accessionYP_002273576 
Protein GI209400400 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTTA TTAAAACTTT TTCCGGGAAG CATTTTTATT ATGACAGGAT AAATAAAGAC 
GACATCGATA TTAACGATAT CGCGGTTTCC CTTTCAAATA TCTGTCGCTT TGCCGGTCAT
CTTTCGCACT TCTACAGCGT CGCCCAACAT GCGGTTCTTT GCAGCCAGCT GGTACCGCAG
GAATTTGCTT TTGAAGCATT AATGCATGAT GCAACAGAAG CGTATTGCCA GGACATCCCC
GCTCCACTGA AACGCCTTCT TCCTGACTAT AAACGGATGG AAGAAAAAAT TGACGCCGTA
ATCCGTGAGA AATACGGGTT ACCCCCAGTT ATGAGTACGC CCGTGAAATA TGCCGATCTT
ATCATGCTGG CAACCGAACG CCGCGATCTC GGGCTTGATG ATGGCTCTTT CTGGCCTGTA
CTGGAAGGCA TCCCGGCAAC AGAGATGTTC AACGTGATTC CACTGGCACC TAGCCATGCC
TACGGGATGT TTATGGAACG TTTTAACGAG TTATCGGAGT TACACAAATG CGCATGA
 
Protein sequence
MSFIKTFSGK HFYYDRINKD DIDINDIAVS LSNICRFAGH LSHFYSVAQH AVLCSQLVPQ 
EFAFEALMHD ATEAYCQDIP APLKRLLPDY KRMEEKIDAV IREKYGLPPV MSTPVKYADL
IMLATERRDL GLDDGSFWPV LEGIPATEMF NVIPLAPSHA YGMFMERFNE LSELHKCA