| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5521 |
|---|
| Symbol | ubiA |
|---|
| ID | 6968466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 5170552 |
|---|
| End bp | 5171424 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643389164 |
|---|
| Product | 4-hydroxybenzoate octaprenyltransferase |
|---|
| Protein accession | YP_002273561 |
|---|
| Protein GI | 209399362 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.272125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTGGA GTCTGACGCA GAATAAGCTG CTGGCGTTTC ATCGCTTAAT GCGTACGGAT
AAGCCAATTG GCGCGTTACT GCTGCTCTGG CCAACATTAT GGGCGTTGTG GGTGGCGACA
CCGGGCGTTC CCCAGCTCTG GATCCTGGCG GTGTTTGTCG CGGGTGTCTG GCTGATGCGC
GCTGCCGGAT GTGTGGTGAA TGATTATGCT GACCGCAAGT TTGATGGTCA TGTTAAGCGC
ACGGCGAACC GACCACTTCC CAGCGGCGCG GTAACAGAGA AAGAGGCGCG CGCGCTGTTT
GTAGTGCTGG TACTGATTTC GTTTTTACTG GTGCTGACGC TGAATACGAT GACCATTCTG
TTGTCGATTG CCGCGCTAGC GCTGGCGTGG GTGTACCCGT TTATGAAGCG GTATACCCAT
CTACCGCAAG TGGTGCTGGG CGCGGCGTTT GGCTGGTCGA TTCCAATGGC TTTTGCTGCT
GTGAGTGAGT CGGTGCCATT GAGTTGCTGG TTAATGTTCC TCGCCAATAT TCTCTGGGCG
GTGGCTTACG ACACGCAGTA TGCGATGGTT GACCGTGATG ATGATGTGAA GATTGGCATT
AAATCCACCG CAATCCTGTT CGGCCAATAC GATAAATTGA TTATTGGTAT TTTGCAGATT
GGCGTACTGG CGCTGATGGC GATTATCGGT GAGTTAAATG GCTTAGGCTG GGGATATTAC
TGGTCAATTC TGGTGGCTGG CGCGCTGTTT GTTTATCAAC AAAAACTGAT TGCCAACCGC
GAGCGCGAAG CCTGCTTTAA AGCATTTATG AATAATAACT ATGTTGGTCT GGTACTGTTT
TTAGGGCTGG CAATGAGTTA CTGGCATTTC TGA
|
|---|
| Protein sequence | MEWSLTQNKL LAFHRLMRTD KPIGALLLLW PTLWALWVAT PGVPQLWILA VFVAGVWLMR
AAGCVVNDYA DRKFDGHVKR TANRPLPSGA VTEKEARALF VVLVLISFLL VLTLNTMTIL
LSIAALALAW VYPFMKRYTH LPQVVLGAAF GWSIPMAFAA VSESVPLSCW LMFLANILWA
VAYDTQYAMV DRDDDVKIGI KSTAILFGQY DKLIIGILQI GVLALMAIIG ELNGLGWGYY
WSILVAGALF VYQQKLIANR EREACFKAFM NNNYVGLVLF LGLAMSYWHF
|
|---|
| |