Gene ECH74115_5498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5498 
Symbol 
ID6968326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5145929 
End bp5146735 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content52% 
IMG OID643389142 
Productsorbitol-6-phosphate 2-dehydrogenase 
Protein accessionYP_002273539 
Protein GI209395780 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGT GGTTAAATTT GCAGGATAAA ATCATTATCG TCACCGGCGG CGCATCCGGT 
ATTGGTCTGG CGATTGTAGA GGAATTATTA GCACAAGGCG CAAACGTACA GATGGTAGAT
ATTCACGGTG GCGATGGACA ATATGAAGGT CATAAAGGCT ATCAGTTTTG GCCGACCGAT
ATTTCCAGCG CCAAAGAGGT AAATCATACG GTAGCGGAAA TTATCCAGCG TTTTGGTCGC
ATCGACGGTC TGGTCAATAA CGCCGGGGTC AATTTCCCGC GTCTGCTGGT CGATGAGAAA
GCGCCTGCCG GGCAGTATGA ACTCAACGAA GCTGCATTCG AAAAAATGGT CAATATCAAC
CAGAAAGGCG TTTTTCTGAT GTCGCAGGCG GTGGCGCGAC AGATGGTCAA ACAACATGAT
GGCGTGATTG TGAATGTTTC CTCAGAAAGT GGGCTGGAAG GCTCAGAAGG CCAAAGCTGT
TACGCCGCTA CCAAAGCCGC GCTCAATAGC TTCACGCGCT CCTGGTCGAA AGAGCTGGGT
AAACACGGTA TCCGTGTGGT CGGTATCGCG CCGGGGATTC TGGAAAAAAC CGGGCTACGC
ACGCCGGAAT ATGAAGAGGC GCTGGCGTGG ACGCGCAATA TCACCGTCGA GCAGCTGCGT
GAAGGCTATA CCAAAAACGC CATTCCTATT GGGCGCGCCG GAAGATTAGC AGAAATCGCT
GATTTTGTTT GTTATCTGCT GTCTGAACGC GCCAGCTATA TCACCGGAGT AACCACTAAC
ATTGCGGGCG GCAAAACGCG CGGCTAA
 
Protein sequence
MQTWLNLQDK IIIVTGGASG IGLAIVEELL AQGANVQMVD IHGGDGQYEG HKGYQFWPTD 
ISSAKEVNHT VAEIIQRFGR IDGLVNNAGV NFPRLLVDEK APAGQYELNE AAFEKMVNIN
QKGVFLMSQA VARQMVKQHD GVIVNVSSES GLEGSEGQSC YAATKAALNS FTRSWSKELG
KHGIRVVGIA PGILEKTGLR TPEYEEALAW TRNITVEQLR EGYTKNAIPI GRAGRLAEIA
DFVCYLLSER ASYITGVTTN IAGGKTRG