| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5491 |
|---|
| Symbol | pepE |
|---|
| ID | 6969811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 5140967 |
|---|
| End bp | 5141656 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643389136 |
|---|
| Product | peptidase E |
|---|
| Protein accession | YP_002273533 |
|---|
| Protein GI | 209398575 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3340] Peptidase E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.831674 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGC TTTTATTGAG TAACTCGACG CTGCCGGGTA AAGCCTGGCT GGAACATGCA
CTGCCGCTGA TTGCTGAACA GTTGCAGGGT CGCCGCTCAG CGGTGTTTAT CCCTTTCGCT
GGCGTAACGC AGACCTGGGA TGATTACACA GCGAAAACGG CTGCGGTTCT CGCTCCGCTG
GGTGTTTCTG TCACCGGTAT TCATAGCGTT GTCGATCCCG TTGCCGCGAT TGAAAATGCG
GAAATTGTGA TTGTCGGCGG CGGTAATACT TTCCAGTTGC TGAAACAGTG CCGCGAGCGC
GGGCTGCTGG CTCCAATTAC TGACGTGGTT AAACGTGGCG CGCTGTATAT TGGCTGGAGC
GCAGGCGCTA ACCTTGCTTG CCCAACCATT CGTACCACCA ACGATATGCC GATTGTCGAT
CCGCAAGGTT TCGATGCGCT AAATCTGTTC CCGTTGCAAA TCAACCCGCA CTTCACCAAC
GCGCTGCCGG AAGGCCATAA AGGTGAAACC CGTGAGCAGC GTATTCGCGA ACTGCTGGTC
GTCGCGCCAG AACTGACGAT TATTGGTCTA CCGGAAGGTA ACTGGATCAC AGTGAGTAAA
GGTCACGCAA CGCTGGGTGG CCCGAATACC ACCTATGTGT TTAAGGCCGG TGAAGAAGCG
GTTCCGCTGG AAGCTGGTCA CCGTTTTTAA
|
|---|
| Protein sequence | MELLLLSNST LPGKAWLEHA LPLIAEQLQG RRSAVFIPFA GVTQTWDDYT AKTAAVLAPL
GVSVTGIHSV VDPVAAIENA EIVIVGGGNT FQLLKQCRER GLLAPITDVV KRGALYIGWS
AGANLACPTI RTTNDMPIVD PQGFDALNLF PLQINPHFTN ALPEGHKGET REQRIRELLV
VAPELTIIGL PEGNWITVSK GHATLGGPNT TYVFKAGEEA VPLEAGHRF
|
|---|
| |