| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5489 |
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| Symbol | metH |
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| ID | 6968177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 5135342 |
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| End bp | 5139025 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643389134 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_002273531 |
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| Protein GI | 209397983 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGCA AAGTGGAACA ACTGCGTGCG CAGTTAAATG AACGTATTCT GGTGCTGGAC
GGCGGTATGG GCACCATGAT CCAGAGCTAT CGACTGAACG AAGCCGATTT TCGTGGTGAA
CGCTTTGCCG ACTGGCCATG CGACCTCAAA GGCAATAACG ATCTGCTGGT GCTAAGCAAA
CCGGAAGTGA TCGCCGCTAT CCACAACGCC TACTTTGAAG CGGGCGCGGA TATCATCGAA
ACCAACACCT TCAACTCCAC GACCATTGCG ATGGCGGATT ACCAGATGGA ATCCCTGTCG
GCGGAAATCA ACTTTGCGGC GGCGAAACTG GCGCGCGCCT GTGCTGACGA GTGGACCGCG
CGCACGCCGG AGAAACCGCG CTACGTTGCC GGCGTTCTCG GCCCAACCAA CCGCACGGCG
TCCATTTCTC CGGACGTGAA CGATCCGGCA TTCCGCAACA TCACTTTTGA CCAGCTGGTG
GCGGCCTATC GCGAATCCAC CAAAGCATTA GTGGAAGGCG GTGCGGATCT GATTCTGATT
GAAACCGTTT TCGACACCCT TAACGCCAAA GCGGCGGTCT TTGCGGTGAA AACGGAGTTC
GAAGCGTTAG GCGTTGAGCT GCCGATTATG ATCTCCGGCA CCATCACCGA CGCCTCCGGG
CGCACGCTCT CCGGACAGAC CACCGAAGCA TTTTACAACT CCCTGCGCCA TGCCGAAGCC
CTGACTTTTG GCCTCAACTG CGCGCTGGGG CCAGATGAAC TGCGCCAGTA CGTGCAGGAA
CTATCACGGA TTGCGGAATG CTACGTCACC GCGCACCCGA ACGCCGGGCT ACCCAACGCC
TTTGGTGAGT ACGATCTCGA CGCCGACACG ATGGCAAAAC AGATACGTGA ATGGGCGCAA
GCGGGTTTTC TCAATATCGT CGGCGGCTGC TGTGGCACCA CGCCACAACA TATTGCAGCG
ATGAGTCGTG CAGTAGAAGG ATTAGCGCCG CGCAAACTGC CTGAAATTCC CGTAGCCTGC
CGTTTGTCCG GCCTGGAGCC GCTGAACATT GGCGACGATA GCCTGTTTGT GAACGTGGGT
GAACGCACCA ACGTCACCGG TTCCGCTAAG TTCAAGCGCC TGATCAAAGA AGAGAAATAC
AGCGAGGCGC TGGATGTAGC GCGTCAGCAG GTGGAAAACG GCGCGCAGAT TATCGATATC
AACATGGATG AAGGGATGCT CGATGCCGAA GCGGCGATGG TGCGTTTTCT CAATCTGATT
GCCGGTGAAC CGGATATCGC TCGCGTGCCG ATTATGATCG ACTCCTCAAA ATGGGAGGTC
ATCGAAAAGG GGCTGAAGTG TATTCAGGGC AAAGGCATTG TTAACTCTAT CTCAATGAAA
GAGGGCGTCG ACGCCTTTAT CCATCATGCG AAACTGTTGC GTCGTTACGG TGCAGCGGTG
GTGGTAATGG CCTTTGACGA ACAGGGGCAG GCCGATACCC GCGCACGGAA AATTGAGATT
TGCCGTCGGG CGTACAAAAT CCTCACCGAA GAGGTTGGCT TCCCGCCAGA AGATATCATC
TTCGACCCGA ACATCTTCGC GGTCGCCACC GGCATTGAAG AGCACAACAA CTATGCGCAG
GACTTTATCG GCGCCTGCGA AGACATCAAA CGCGAACTGC CGCACGCGCT GATTTCCGGC
GGCGTATCTA ACGTTTCTTT CTCATTCCGT GGCAACGATC CGGTGCGCGA AGCCATTCAC
GCGGTGTTCC TCTACTACGC TATTCGCAAT GGCATGGATA TGGGGATCGT CAACGCCGGG
CAACTGGCGA TTTACGACGA CCTGCCCGCT GAACTGCGCG ACGCGGTGGA AGATGTGATT
CTTAATCGTC GCGATGATGG CACTGAGCGT TTACTGGAGC TTGCCGAGAA ATATCGCGGC
AGCAAAACCG ACGACACCGC TAACGCCCAG CAGGCGGAGT GGCGCTCGTG GGAAGTGAAT
AAACGTCTGG AATACTCGCT GGTCAAAGGC ATTACTGAGT TTATCGAGCA GGATACCGAA
GAAGCCCGCC AGCAGGCTAC GCGCCCGATT GAAGTGATTG AAGGCCCGCT AATGGACGGC
ATGAACGTGG TCGGCGATCT GTTCGGCGAA GGGAAAATGT TCCTGCCACA GGTGGTCAAA
TCGGCGCGTG TGATGAAGCA GGCAGTGGCC TACCTCGAAC CGTTTATTGA AGCCAGCAAA
GAGCAGGGCA AAACCAACGG CAAGATGGTG ATCGCCACCG TGAAGGGCGA CGTCCACGAC
ATCGGTAAAA ATATCGTTGG TGTGGTGCTG CAATGTAACA ACTACGAAAT TGTCGATCTC
GGCGTTATGG TGCCTGCGGA AAAAATTCTC CGTACCGCTA AAGAAGTGAA TGCTGATCTG
ATTGGACTTT CGGGGCTTAT CACGCCGTCG CTGGACGAGA TGGTTAACGT GGCGAAAGAG
ATGGAGCGTC AGGGCTTCAC CATTCCGTTA CTGATCGGTG GCGCGACGAC CTCAAAAGCG
CACACGGCGG TGAAAATCGA GCAGAACTAC AGCGGCCCGA CGGTGTATGT GCAGAATGCC
TCGCGCACCG TTGGTGTGGT GGCGGCGCTG CTTTCCGATA CTCAGCGCGA TGATTTTGTC
GCTCGTACCC GCAAGGAGTA CGAAACCGTA CGTATTCAGC ACGGGCGCAA GAAACCACGC
ACACCACCGG TCACGCTGGA AGCGGCGCGC GATAACGACT TCGCTTTTGA CTGGCAGGCT
TACACGCCGC CGGTGGCGCA CCGTCTCGGC GTGCAGGAAG TTGAAGCCAG CATCGAAACT
CTGCGTAATT ACATCGACTG GACACCGTTC TTTATGACCT GGTCGCTGGC CGGGAAGTAT
CCGCGCATTC TGGAAGATGA AGTGGTGGGC GTTGAGGCGC AGCGGCTGTT TAAAGACGCC
AACGACATGC TGGATAAATT AAGCGCCGAG AAAACGCTGA ATCCGCGTGG CGTGGTGGGC
CTGTTCCCGG CAAACCGTGT GGGCGATGAC ATTGAAATCT ACCGTGACGA AACGCGCACC
CATGTGATCA ACGTCAGCCA CCATCTGCGT CAACAGACCG AAAAAACGGG ATTCGCTAAC
TACTGTCTCG CTGACTTCGT TGCGCCGAAG CTTTCTGGTA AAGCAGATTA CATCGGCGCA
TTTGCCGTGA CTGGCGGGCT GGAAGAGGAC GCACTGGCTG ATGCCTTTGA AGCGCAGCAC
GATGATTACA ACAAAATCAT GGTGAAAGCG CTTGCCGACC GTTTAGCCGA AGCCTTTGCG
GAGTATCTCC ATGAGCGTGT GCGTAAAGTC TACTGGGGCT ATGCGCCGAA CGAGAACCTC
AGCAACGAAG AACTGATCCG CGAAAACTAC CAGGGCATCC GTCCGGCACC GGGCTACCCG
GCCTGCCCGG AACATACGGA AAAAGCCACC ATCTGGGAGC TGCTGGAAGT GGAAAAACAT
ACCGGCATGA AACTCACAGA ATCTTTCGCC ATGTGGCCCG GTGCATCGGT TTCGGGTTGG
TATTTCAGCC ACCCGGACAG CAAGTACTAC GCGGTGGCGC AAATTCAGCG CGATCAGGTT
GAAGACTATG CCCGCCGTAA AGGTATGAGC GTCTCCGATG TTGAGCGCTG GCTGGCACCG
AATCTGGGGT ATGACGCGGA CTGA
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| Protein sequence | MSSKVEQLRA QLNERILVLD GGMGTMIQSY RLNEADFRGE RFADWPCDLK GNNDLLVLSK
PEVIAAIHNA YFEAGADIIE TNTFNSTTIA MADYQMESLS AEINFAAAKL ARACADEWTA
RTPEKPRYVA GVLGPTNRTA SISPDVNDPA FRNITFDQLV AAYRESTKAL VEGGADLILI
ETVFDTLNAK AAVFAVKTEF EALGVELPIM ISGTITDASG RTLSGQTTEA FYNSLRHAEA
LTFGLNCALG PDELRQYVQE LSRIAECYVT AHPNAGLPNA FGEYDLDADT MAKQIREWAQ
AGFLNIVGGC CGTTPQHIAA MSRAVEGLAP RKLPEIPVAC RLSGLEPLNI GDDSLFVNVG
ERTNVTGSAK FKRLIKEEKY SEALDVARQQ VENGAQIIDI NMDEGMLDAE AAMVRFLNLI
AGEPDIARVP IMIDSSKWEV IEKGLKCIQG KGIVNSISMK EGVDAFIHHA KLLRRYGAAV
VVMAFDEQGQ ADTRARKIEI CRRAYKILTE EVGFPPEDII FDPNIFAVAT GIEEHNNYAQ
DFIGACEDIK RELPHALISG GVSNVSFSFR GNDPVREAIH AVFLYYAIRN GMDMGIVNAG
QLAIYDDLPA ELRDAVEDVI LNRRDDGTER LLELAEKYRG SKTDDTANAQ QAEWRSWEVN
KRLEYSLVKG ITEFIEQDTE EARQQATRPI EVIEGPLMDG MNVVGDLFGE GKMFLPQVVK
SARVMKQAVA YLEPFIEASK EQGKTNGKMV IATVKGDVHD IGKNIVGVVL QCNNYEIVDL
GVMVPAEKIL RTAKEVNADL IGLSGLITPS LDEMVNVAKE MERQGFTIPL LIGGATTSKA
HTAVKIEQNY SGPTVYVQNA SRTVGVVAAL LSDTQRDDFV ARTRKEYETV RIQHGRKKPR
TPPVTLEAAR DNDFAFDWQA YTPPVAHRLG VQEVEASIET LRNYIDWTPF FMTWSLAGKY
PRILEDEVVG VEAQRLFKDA NDMLDKLSAE KTLNPRGVVG LFPANRVGDD IEIYRDETRT
HVINVSHHLR QQTEKTGFAN YCLADFVAPK LSGKADYIGA FAVTGGLEED ALADAFEAQH
DDYNKIMVKA LADRLAEAFA EYLHERVRKV YWGYAPNENL SNEELIRENY QGIRPAPGYP
ACPEHTEKAT IWELLEVEKH TGMKLTESFA MWPGASVSGW YFSHPDSKYY AVAQIQRDQV
EDYARRKGMS VSDVERWLAP NLGYDAD
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