Gene ECH74115_5485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5485 
SymbolaceA 
ID6971658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5128622 
End bp5129926 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content56% 
IMG OID643389130 
Productisocitrate lyase 
Protein accessionYP_002273527 
Protein GI209398361 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC GTACACAACA AATTGAAGAA TTACAGAAAG AGTGGACTCA ACCGCGTTGG 
GAAGGAATTA CTCGCCCATA CAGCGCGGAA GATGTGGTGA AATTACGCGG TTCAGTCAAT
CCTGAATGCA CGCTGGCGCA ACTGGGCGCG GCGAAAATGT GGCGTCTGCT GCATGGCGAG
TCGAAAAAAG GCTACATCAA CAGCCTCGGT GCACTGACTG GCGGTCAGGC GCTGCAACAG
GCGAAAGCGG GTATTGAAGC GGTCTATCTG TCGGGATGGC AGGTAGCGGC GGACGCTAAC
CTGGCGGCCA GCATGTATCC GGATCAGTCG CTCTATCCGG CAAACTCGGT GCCAGCTGTG
GTGGAGCGGA TCAACAACAC TTTCCGCCGT GCGGATCAGA TCCAATGGTC CGCGGGCATT
GAGCCGGGCG ATCCGCGCTA TGTCGATTAC TTCCTGCCGA TCGTTGCCGA CGCGGAAGCC
GGTTTTGGCG GTGTCCTGAA TGCCTTTGAA CTGATGAAAG CGATGATTGA AGCCGGTGCA
GCGGCAGTTC ACTTCGAAGA TCAGCTGGCG TCAGTGAAGA AATGCGGTCA CATGGGCGGC
AAAGTTTTGG TGCCAACTCA GGAAGCTATT CAGAAACTGG TCGCGGCGCG TCTGGCAGCT
GACGTGACGG GCGTTCCAAC CCTGCTGGTT GCACGTACCG ATGCTGATGC GGCGGATCTG
ATCACCTCCG ATTGCGACCC GTATGACAGC GAATTTATTA CCGGCGAGCG TACCAGTGAA
GGCTTCTTCC GTACTCATGC GGGCATTGAG CAAGCGATCA GCCGTGGCCT GGCGTATGCG
CCATATGCTG ACCTGGTATG GTGTGAAACC TCCACGCCGG ATCTGGAACT GGCGCGTCGC
TTTGCGGAAG CTATCCACGC GAAATATCCG GGCAAACTGC TGGCTTATAA CTGCTCGCCG
TCGTTCAACT GGCAGAAAAA CCTCGACGAC AACACTATTG CCAGCTTCCA GCAGCAGCTG
TCGGATATGG GCTACAAGTT CCAGTTCATC ACCCTGGCAG GTATCCACAG CATGTGGTTC
AACATGTTTG ATCTGGCAAA CGCCTATGCC CAGGGCGAGG GTATGAAGCA CTATGTTGAG
AAAGTGCAGC AGCCGGAATT CGCCGCCGCG AAAGATGGCT ACACCTTCGT ATCTCACCAG
CAGGAAGTGG GTACAGGTTA CTTCGATAAA GTGACGACCA TTATTCAGGG CGGCACGTCG
TCGGTTACCG CGCTGACTGG CTCCACCGAA GAATCGCAGT TCTAA
 
Protein sequence
MKTRTQQIEE LQKEWTQPRW EGITRPYSAE DVVKLRGSVN PECTLAQLGA AKMWRLLHGE 
SKKGYINSLG ALTGGQALQQ AKAGIEAVYL SGWQVAADAN LAASMYPDQS LYPANSVPAV
VERINNTFRR ADQIQWSAGI EPGDPRYVDY FLPIVADAEA GFGGVLNAFE LMKAMIEAGA
AAVHFEDQLA SVKKCGHMGG KVLVPTQEAI QKLVAARLAA DVTGVPTLLV ARTDADAADL
ITSDCDPYDS EFITGERTSE GFFRTHAGIE QAISRGLAYA PYADLVWCET STPDLELARR
FAEAIHAKYP GKLLAYNCSP SFNWQKNLDD NTIASFQQQL SDMGYKFQFI TLAGIHSMWF
NMFDLANAYA QGEGMKHYVE KVQQPEFAAA KDGYTFVSHQ QEVGTGYFDK VTTIIQGGTS
SVTALTGSTE ESQF