Gene ECH74115_5483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5483 
SymbolmetA 
ID6967808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5125793 
End bp5126722 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content50% 
IMG OID643389128 
Producthomoserine O-succinyltransferase 
Protein accessionYP_002273525 
Protein GI209400154 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1897] Homoserine trans-succinylase 
TIGRFAM ID[TIGR01001] homoserine O-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTC GTGTGCCGGA CGAGCTACCC GCCGTCAATT TCTTGCGTGA AGAAAACGTC 
TTTGTGATGA CAACTTCTCG TGCGTCTGGT CAGGAAATTC GTCCACTTAA GGTTCTGATC
CTTAACCTGA TGCCGAAGAA GATTGAAACT GAAAATCAGT TTCTGCGCCT GCTTTCAAAC
TCACCTTTGC AGGTCGATAT TCAGCTGTTG CGCATCGATT CCCGTGAATC GCGTAACACG
CCCGCAGAGC ATCTGAACAA CTTCTACTGT AACTTTGAAG ATATTCAGGA ACAGAACTTT
GACGGTCTGA TTGTAACCGG TGCGCCGCTG GGCCTGGTGG AGTTTAATGA TGTCGCTTAC
TGGCCGCAGA TCAAACAGGT GCTGGAGTGG TCGAAAGATC ACGTCACCTC GACGCTGTTT
GTCTGCTGGG CGGTACAGGC AGCGCTCAAT ATCCTCTACG GCATTCCTAA GCAAACTCGC
ACCGACAAAC TCTCTGGCGT TTACGAGCAT CATATTCTCC ATCCTCATGC GCTTCTGACG
CGTGGCTTTG ATGATTCATT CTTGGCACCG CATTCGCGCT ATGCTGACTT TCCGGCAGCG
TTGATTCGTG ATTACACCGA TCTGGAAATT CTGGCAGAGA CGGAAGAAGG GGATGCATAT
CTGTTTGCCA GTAAAGATAA GCGCATTGCC TTTGTGACGG GCCATCCCGA ATATGATGCG
CAAACGCTGG CGCAGGAATA TTTCCGCGAT GTGGAAGCCG GACTAGACCC GGAAGTACCG
TATAACTATT TCCCGCACAA TGATCCGCAA AACAAACCGC GAGCGAGCTG GCGTAGTCAC
GGTAATTTGC TGTTTACCAA CTGGCTCAAC TATTACGTCT ACCAGATCAC GCCATACGAT
CTACGGCACA TGAATCCAAC GCTGGATTAA
 
Protein sequence
MPIRVPDELP AVNFLREENV FVMTTSRASG QEIRPLKVLI LNLMPKKIET ENQFLRLLSN 
SPLQVDIQLL RIDSRESRNT PAEHLNNFYC NFEDIQEQNF DGLIVTGAPL GLVEFNDVAY
WPQIKQVLEW SKDHVTSTLF VCWAVQAALN ILYGIPKQTR TDKLSGVYEH HILHPHALLT
RGFDDSFLAP HSRYADFPAA LIRDYTDLEI LAETEEGDAY LFASKDKRIA FVTGHPEYDA
QTLAQEYFRD VEAGLDPEVP YNYFPHNDPQ NKPRASWRSH GNLLFTNWLN YYVYQITPYD
LRHMNPTLD