Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5449 |
Symbol | rplA |
ID | 6971047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 5091009 |
End bp | 5091713 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643389099 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_002273500 |
Protein GI | 209396827 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000118396 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00123384 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAAAC TGACCAAGCG CATGCGTGTT ATCCGCGAGA AAGTTGATGC AACCAAACAG TACGACATCA ACGAAGCTAT CGCTCTGCTG AAAGAGCTGG CGACTGCTAA ATTCGTAGAA AGCGTGGACG TAGCTGTTAA CCTCGGCATC GACGCTCGTA AATCTGACCA GAACGTACGT GGTGCAACTG TACTGCCGCA CGGTACTGGC CGGTCCGTTC GCGTAGCCGT ATTTACCCAG GGTGCAAACG CTGAAGCTGC TAAAGCTGCA GGTGCTGAAC TGGTAGGTAT GGAAGATCTG GCTGACCAGA TCAAGAAAGG CGAAATGAAC TTTGACGTTG TTATTGCTTC TCCGGATGCA ATGCGCGTTG TTGGCCAGCT GGGCCAGGTT CTGGGTCCGC GCGGCCTGAT GCCAAACCCG AAAGTGGGTA CTGTAACGCC GAACGTTGCT GAAGCGGTTA AAAACGCTAA AGCTGGCCAG GTTCGTTACC GTAACGACAA AAACGGCATC ATCCACACCA CCATCGGTAA AGTGGACTTT GACGCTGACA AACTGAAAGA AAACCTGGAA GCTCTGCTGG TTGCGCTGAA AAAAGCAAAA CCGACTCAGG CGAAAGGCGT GTACATCAAG AAAGTTAGCA TCTCCACCAC CATGGGTGCA GGTGTTGCAG TTGACCAGGC TGGCCTGAGC GCTTCTGTAA ACTAA
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Protein sequence | MAKLTKRMRV IREKVDATKQ YDINEAIALL KELATAKFVE SVDVAVNLGI DARKSDQNVR GATVLPHGTG RSVRVAVFTQ GANAEAAKAA GAELVGMEDL ADQIKKGEMN FDVVIASPDA MRVVGQLGQV LGPRGLMPNP KVGTVTPNVA EAVKNAKAGQ VRYRNDKNGI IHTTIGKVDF DADKLKENLE ALLVALKKAK PTQAKGVYIK KVSISTTMGA GVAVDQAGLS ASVN
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