| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5428 |
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| Symbol | trmA |
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| ID | 6967833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 5074548 |
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| End bp | 5075648 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643389080 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | YP_002273489 |
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| Protein GI | 209397508 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0574953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0893773 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCG AACACCTTCC AACAGAACAG TATGAAGCGC AGTTAGCCGA AAAAGTGGTA
CGTTTGCAAA GTATGATGGC ACCGTTTTCT GACCTGGTTC CGGAAGTGTT TCGCTCGCCG
GTCAGTCATT ACCGGATGCG TGCGGAGTTC CGCATCTGGC ACGATGGCGA TGACCTGTAC
CACATCATTT TCGATCAACA AACCAAAAGC CGTATCCGGG TGGATAGCTT CCCCGCCGCC
AGTGAACTCA TCAACCAGTT GATGACGGCG ATGATTGCGG GTGTGCGTAA TAATCCCGTT
CTGCGCCACA AGTTGTTCCA GATTGATTAC CTCACCACGC TGAGTAATCA GGCGGTGGTT
TCCCTGCTGT ACCATAAAAA GCTGGATGAT GAGTGGCGTC AGGAAGCGGA AGCCCTGCGC
GATGCACTGC GCGCGCAGAA TCTGAATGTG CATCTGATTG GTCGGGCAAC GAAAACCAAA
ATCGCGCTGG ATCAAGATTA CATCGACGAG CGTCTGCCGG TCGCAGGGAA AGAGATGATC
TATCGTCAGG TAGAAAACAG CTTTACCCAG CCGAACGCGG CGATGAATAT TCAGATGCTG
GAATGGGCGC TGGACGTAAC CAAAGGCTCA AAAGGCGATT TACTGGAGCT GTACTGCGGC
AACGGTAACT TCTCATTAGC GCTGGCGCGC AATTTTGATC GGGTATTAGC CACCGAAATC
GCCAAGCCAT CAGTCGCTGC CGCGCAATAC AACATTGCCG CTAACCATAT TGATAACGTA
CAAATTATTC GTATGGCGGC AGAAGAATTT ACTCAGGCGA TGAATGGCGT GCGCGAGTTT
AACCGCCTGC AAGGGATCGA CTTAAAGAGT TATCAGTGCG AAACCATTTT TGTCGACCCA
CCTCGCAGCG GTCTGGACAG TGAAACCGAG AAAATGGTGC AGGCGTATCC ACGTATTCTG
TATATCTCCT GCAATCCGGA AACGTTATGC AAAAATCTGG AAACATTAAG CCAGACGCAC
AAGGTCGAAC GTCTGGCTCT GTTTGATCAG TTCCCCTACA CGCACCATAT GGAGTGCAGC
GTATTACTGA CCGCGAAGTA A
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| Protein sequence | MTPEHLPTEQ YEAQLAEKVV RLQSMMAPFS DLVPEVFRSP VSHYRMRAEF RIWHDGDDLY
HIIFDQQTKS RIRVDSFPAA SELINQLMTA MIAGVRNNPV LRHKLFQIDY LTTLSNQAVV
SLLYHKKLDD EWRQEAEALR DALRAQNLNV HLIGRATKTK IALDQDYIDE RLPVAGKEMI
YRQVENSFTQ PNAAMNIQML EWALDVTKGS KGDLLELYCG NGNFSLALAR NFDRVLATEI
AKPSVAAAQY NIAANHIDNV QIIRMAAEEF TQAMNGVREF NRLQGIDLKS YQCETIFVDP
PRSGLDSETE KMVQAYPRIL YISCNPETLC KNLETLSQTH KVERLALFDQ FPYTHHMECS
VLLTAK
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