Gene ECH74115_5409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5409 
Symbol 
ID6971033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5052525 
End bp5053604 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content54% 
IMG OID643389062 
Productputative fructose-like permease EIIC subunit 2 
Protein accessionYP_002273471 
Protein GI209398507 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1299] Phosphotransferase system, fructose-specific IIC component 
TIGRFAM ID[TIGR01427] PTS system, fructose subfamily, IIC component 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGT TGGTGCAGAT CCTGAAAAAT ACCCGTCAGC ATTTAATGAC GGGCGTTTCA 
CACATGATTC CCTTCGTGGT ATCGGGCGGT ATTTTGCTGG CGGTTTCCGT CATGTTGTAT
GGCAAAGGCG CAGTGCCGGA TGCCGTAGCC GATCCGAATC TGAAAAAACT GTTTGATATC
GGCGTTGCAG GTTTGACGCT GATGGTGCCT TTCCTCGCCG CTTACATCGG TTACTCCATT
GCAGAGCGTT CTGCGCTGGC TCCGTGCGCT ATCGGTGCCT GGGTTGGTAA CAGCTTTGGT
GCGGGCTTCT TTGGTGCACT GATCGCCGGG ATTATCGGCG GCATCGTGGT GCATTACCTG
AAGAAAATTC CGGTGCATAA AGTTCTGCGC TCGGTGATGC CCATCTTCAT CATTCCGATC
GTCGGCACAC TGATTACCGC AGGCATCATG ATGTGGGGTC TGGGCGAGCC TGTAGGGGCG
TTGACCAACA GCCTGACTCA GTGGCTTCAG GGGATGCAGC AGGGCAGCAT TGTTATGCTG
GCGGTGATCA TGGGTCTGAT GCTGGCGTTC GATATGGGCG GTCCGGTTAA CAAAGTGGCC
TATGCCTTCA TGCTGATTTG CGTTGCTCAG GGTGTTTATA CCGTGGTGGC CATTGCTGCC
GTGGGTATTT GTATCCCGCC GCTGGGGATG GGGCTGGCGA CGCTGATTGG TCGTAAAAAT
TTCTCCGCAG AAGAGCGCGA AACCGGTAAA GCGGCGCTGG TGATGGGGTG CGTTGGGGTT
ACTGAAGGGG CGATTCCTTT CGCCGCAGCC GATCCGTTAC GTGTAATTCC TTCCATCATG
GTTGGTTCAG TTTGTGGTGC AGTAACTGCG GCGCTGGTCG GTGCGCAGTG CTATGCAGGC
TGGGGTGGTC TGATTGTGCT GCCGGTGGTT GAAGGTAAGT TGGGTTATAT CGCAGCAGTG
GCTGTCGGGG CGGTTGTGAC GGCAGTCTGC GTGAACGTGC TGAAAAGTCT GGCGCGTAAA
AATGGATCTT CTACTGATGA AAAAGAAGAC GACCTGGATT TGGATTTTGA AATTAATTAA
 
Protein sequence
MNELVQILKN TRQHLMTGVS HMIPFVVSGG ILLAVSVMLY GKGAVPDAVA DPNLKKLFDI 
GVAGLTLMVP FLAAYIGYSI AERSALAPCA IGAWVGNSFG AGFFGALIAG IIGGIVVHYL
KKIPVHKVLR SVMPIFIIPI VGTLITAGIM MWGLGEPVGA LTNSLTQWLQ GMQQGSIVML
AVIMGLMLAF DMGGPVNKVA YAFMLICVAQ GVYTVVAIAA VGICIPPLGM GLATLIGRKN
FSAEERETGK AALVMGCVGV TEGAIPFAAA DPLRVIPSIM VGSVCGAVTA ALVGAQCYAG
WGGLIVLPVV EGKLGYIAAV AVGAVVTAVC VNVLKSLARK NGSSTDEKED DLDLDFEIN